RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	NT5E	P21589	574 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	PIK3R1	P27986	724 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	GABRB3	P28472	473 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	SLC6A8	P48029	635 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	EFNA4	P52798	201 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	CCNG2	Q16589	344 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	PRAMEF9	Q5VWM5	478 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	FAM45BP	Q6NSW5	357 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	SEZ6L2	Q6UXD5	910 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	FBXL14	Q8N1E6	418 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	FAM45A	Q8TCE6	357 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	UBE2E3	Q969T4	207 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	RGMA	Q96B86	450 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	COL21A1	Q96P44	957 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	CENPK	Q9BS16	269 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	PIMREG	Q9BSJ6	248 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	POTEKP	Q9BYX7	375 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	OR51B5	Q9H339	312 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	GLRX2	Q9NS18	164 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	FBXO34	Q9NWN3	711 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	LYAR	Q9NX58	379 aa	Known RBP	12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	BCAP29	Q9UHQ4	241 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	TMEFF2	Q9UIK5	374 aa	Predicted RBP	12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	VWA7	Q9Y334	891 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737	PRR14L	Q5THK1	2151 aa		12.25	□□□□□ -0.45
SMG1-213	ENST00000567737		A0A1W2PS29	197 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	ESYT3	A0FGR9	886 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	NCF1B	A6NI72	391 aa	Predicted RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	OR6C70	A6NIJ9	312 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	NCF1C	A8MVU1	366 aa	Predicted RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	VWC2L	B2RUY7	222 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	NDUFS8	O00217	210 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	ABCD4	O14678	606 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	TMPRSS2	O15393	492 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	REM1	O75628	298 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	AHSG	P02765	367 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	TUBB	P07437	444 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	NCF1	P14598	390 aa	Predicted RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	NR4A2	P43354	598 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	EIF1AX	P47813	144 aa	Known RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	PDLIM4	P50479	330 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	IRF8	Q02556	426 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	SLMAP	Q14BN4	828 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	SFRP5	Q5T4F7	317 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	EXOC3L1	Q86VI1	746 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	MUC15	Q8N387	334 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	LRRC17	Q8N6Y2	441 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	KISS1R	Q969F8	398 aa	Predicted RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	HES6	Q96HZ4	224 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	CNOT10	Q9H9A5	744 aa	Known RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	XAB2	Q9HCS7	855 aa	Known RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	POU2F3	Q9UKI9	436 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	MCTS1	Q9ULC4	181 aa	Known RBP	12.24	□□□□□ -0.45
SMG1-213	ENST00000567737	PCDHGA11	Q9Y5H2	935 aa		12.24	□□□□□ -0.45
SMG1-213	ENST00000567737		A0A1W2PR48	441 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	OR2M5	A3KFT3	312 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	GCM2	O75603	506 aa	Predicted RBP	12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	BMP4	P12644	408 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	ZNF37A	P17032	561 aa	Predicted RBP	12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	SERPINB1	P30740	379 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	CASP2	P42575	452 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	CHIT1	Q13231	466 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	GANAB	Q14697	944 aa	Known RBP	12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	PDK4	Q16654	411 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	IQCC	Q4KMZ1	466 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	ANKRD22	Q5VYY1	191 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	OR52E8	Q6IFG1	317 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	CAVIN1	Q6NZI2	390 aa	Known RBP	12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	MED27	Q6P2C8	311 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	CYP20A1	Q6UW02	462 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	ADAMTSL2	Q86TH1	951 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	TCAIM	Q8N3R3	496 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	NKAP	Q8N5F7	415 aa	Known RBP	12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	OR5M1	Q8NGP8	315 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	FAM216A	Q8WUB2	273 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	KCTD4	Q8WVF5	259 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	TMBIM1	Q969X1	311 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	RADIL	Q96JH8	1075 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	DHRS9	Q9BPW9	319 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	TMEM79	Q9BSE2	394 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	LACRT	Q9GZZ8	138 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	DSN1	Q9H410	356 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	PPP4R1L	Q9P1A2	415 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	CTNNAL1	Q9UBT7	734 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	AP4B1	Q9Y6B7	739 aa		12.23	□□□□□ -0.45
SMG1-213	ENST00000567737	IGHV4-61	A0A0C4DH41	118 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	GOLGA8M	H3BSY2	632 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	TRIM77	I1YAP6	450 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	PLPP1	O14494	284 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	EIF1AY	O14602	144 aa	Known RBP	12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	ST8SIA5	O15466	376 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	SYNGR4	O95473	234 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	FAM58BP	P0C7Q3	252 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	DRD5	P21918	477 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	MAGEA6	P43360	314 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	VPS41	P49754	854 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	FABP6	P51161	128 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	EFR3A	Q14156	821 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	P2RY6	Q15077	328 aa		12.22	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms