RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	PCNX3	Q9H6A9	2034 aa		12.64	□□□□□ -0.39
PKD1-231	ENST00000566784	AHRR	A9YTQ3	701 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	TMEM114	B3SHH9	223 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	FAM47E-STBD1	D6RA91	191 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	TM9SF1	O15321	606 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	BIRC5	O15392	142 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	CBR3	O75828	277 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	BCKDHA	P12694	445 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	PRF1	P14222	555 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	DDX5	P17844	614 aa	Known RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	KIR3DL1	P43629	444 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	ZNHIT3	Q15649	155 aa	Predicted RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	TNFAIP8L3	Q5GJ75	292 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	LRIG3	Q6UXM1	1119 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	R3HCC1L	Q7Z5L2	792 aa	Known RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	EXOC3L1	Q86VI1	746 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	CCDC71	Q8IV32	467 aa	Predicted RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	PM20D2	Q8IYS1	436 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	ULK2	Q8IYT8	1036 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	WDSUB1	Q8N9V3	476 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	OR4N2	Q8NGD1	307 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	AGR3	Q8TD06	166 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	PPCDC	Q96CD2	204 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	DTNBP1	Q96EV8	351 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	TIMP4	Q99727	224 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	SPOCK3	Q9BQ16	436 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	TREX2	Q9BQ50	279 aa	Predicted RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	LMF2	Q9BU23	707 aa	Known RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	PRDM14	Q9GZV8	571 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	ENKD1	Q9H0I2	346 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	ALKBH4	Q9NXW9	302 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	BAIAP2L1	Q9UHR4	511 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	ZDHHC2	Q9UIJ5	367 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	CBLC	Q9ULV8	474 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	WIF1	Q9Y5W5	379 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	ACTL7B	Q9Y614	415 aa		12.63	□□□□□ -0.39
PKD1-231	ENST00000566784	AKAP10	O43572	662 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	SNUPN	O95149	360 aa	Known RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	DHRS4L1	P0CG22	281 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	RPL3	P39023	403 aa	Known RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	ZFP36L2	P47974	494 aa	Known RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	TFF3	Q07654	80 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	HSPB3	Q12988	150 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	TOMM20	Q15388	145 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.62	□□□□□ -0.39	4e-9	■■■□□ 17.1
PKD1-231	ENST00000566784	DECR1	Q16698	335 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	ATP6AP1L	Q52LC2	224 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	EIPR1	Q53HC9	387 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	ZNF385B	Q569K4	471 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	CEP85L	Q5SZL2	805 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	RIPPLY2	Q5TAB7	128 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	ANKRD26P1	Q6NSI1	321 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	ZNF551	Q7Z340	670 aa	Predicted RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	GDF7	Q7Z4P5	450 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	PLCZ1	Q86YW0	608 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	OR10Q1	Q8NGQ4	319 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	CLHC1	Q8NHS4	586 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	HOXB13	Q92826	284 aa	Predicted RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	CIDEC	Q96AQ7	238 aa	Predicted RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	EFHD2	Q96C19	240 aa	Predicted RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	PKNOX2	Q96KN3	472 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	C3orf30	Q96M34	536 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	ZIM3	Q96PE6	472 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	UGT2B28	Q9BY64	529 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	OR2B2	Q9GZK3	357 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	C3orf14	Q9HBI5	128 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784		Q9N2J8	555 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	KCNJ16	Q9NPI9	418 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	SH3BP4	Q9P0V3	963 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	NTM	Q9P121	344 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	MRTO4	Q9UKD2	239 aa	Known RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	MAPRE3	Q9UPY8	281 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	SLC6A5	Q9Y345	797 aa		12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.62	□□□□□ -0.39
PKD1-231	ENST00000566784	KIAA1549	Q9HCM3	1950 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784		A0A0G2JNJ9	132 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	C2orf72	A6NCS6	295 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	SCAMP2	O15127	329 aa	Known RBP	12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	PEX11A	O75192	247 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	LYPLA1	O75608	230 aa	Predicted RBP	12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	TOX	O94900	526 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	EPPIN	O95925	133 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	ACTL6A	O96019	429 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	SERPINE1	P05121	402 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	SNRPB2	P08579	225 aa	Known RBP	12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	PRPS2	P11908	318 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	CYP4B1	P13584	511 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	IGFBP2	P18065	325 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	BMP7	P18075	431 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	SRD5A2	P31213	254 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	EVI2B	P34910	448 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	GPC1	P35052	558 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	GCK	P35557	465 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	HPCAL1	P37235	193 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	ADH7	P40394	386 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	MAP3K8	P41279	467 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	GAS1	P54826	345 aa		12.61	□□□□□ -0.39
PKD1-231	ENST00000566784	PSMD4	P55036	377 aa	Known RBP	12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms