RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 C1orf226A1L170 272 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 SLC22A20A6NK97 555 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 FAM159BA6NKW6 160 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 SUPT3HB4E1H0 165 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 TSPAN2O60636 221 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 SUPT3HO75486 399 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 SMNDC1O75940 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
RNF40-208ENST00000565995 CBX7O95931 251 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 GBAP04062 536 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 THBDP07204 575 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 LTA4HP09960 611 aaKnown RBP11.5□□□□□ -0.57
RNF40-208ENST00000565995 PPP3CBP16298 524 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 NT5EP21589 574 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 TBXA2RP21731 343 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 CNTFP26441 200 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 GP5P40197 560 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 PLCXD2Q0VAA5 305 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 TNK1Q13470 666 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 CPSF6Q16630 551 aaKnown RBP eCLIP11.5□□□□□ -0.57
RNF40-208ENST00000565995 SLC48A1Q6P1K1 146 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 FAM111BQ6SJ93 734 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 HIPK1Q86Z02 1210 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 PHC2Q8IXK0 858 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 ZNF611Q8N823 705 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 OR2W6PQ8NHA6 318 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 RDH11Q8TC12 318 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 EXT2Q93063 718 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 ZBTB9Q96C00 473 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 ZNF845Q96IR2 970 aaPredicted RBP11.5□□□□□ -0.57
RNF40-208ENST00000565995 SFXN2Q96NB2 322 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 COL21A1Q96P44 957 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 PIGQQ9BRB3 760 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 CXorf56Q9H5V9 222 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 PLSCR4Q9NRQ2 329 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 ZNF175Q9Y473 711 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 PCDHA9Q9Y5H5 950 aa11.5□□□□□ -0.57
RNF40-208ENST00000565995 GOLGA6L10A6NI86 522 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 SYCE1LA8MT33 242 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 LINC01387J3KSC0 135 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 OVOL3O00110 214 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 TLX2O43763 284 aaPredicted RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 SHBGP04278 402 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 INHBAP08476 426 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 NUDT17P0C025 328 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 CT45A8P0DMV1 189 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 CT45A9P0DMV2 189 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 IL11P20809 199 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 DPP4P27487 766 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 SPRP35270 261 aaPredicted RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 NEK2P51955 445 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 ALDH18A1P54886 795 aaKnown RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 DSCR4P56555 118 aaPredicted RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 EEFSECP57772 596 aaKnown RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 PSPHP78330 225 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 NAB1Q13506 487 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 EXOSC7Q15024 291 aaKnown RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 ETFDHQ16134 617 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 KRT71Q3SY84 523 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 CT45A2Q5DJT8 189 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 BEX5Q5H9J7 111 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 C10orf62Q5T681 223 aaPredicted RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 GRTP1Q5TC63 336 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 HMBOX1Q6NT76 420 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 ZNF550Q7Z398 422 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 P4HA3Q7Z4N8 544 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 CNEP1R1Q8N9A8 125 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 ZNF610Q8N9Z0 462 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 ZIM3Q96PE6 472 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 BTBD9Q96Q07 612 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 PAFAH2Q99487 392 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 HEATR1Q9H583 2144 aaKnown RBP11.49□□□□□ -0.57
RNF40-208ENST00000565995 IPPKQ9H8X2 491 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 PRM3Q9NNZ6 103 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 AHSPQ9NZD4 102 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 PRODH2Q9UF12 536 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 BCAP29Q9UHQ4 241 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 PLLPQ9Y342 182 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 RNF11Q9Y3C5 154 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 ANK2Q01484 3957 aa11.49□□□□□ -0.57
RNF40-208ENST00000565995 PLCE1Q9P212 2302 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.48□□□□□ -0.57
RNF40-208ENST00000565995 TLDC2A0PJX2 215 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 RNF212BA8MTL3 300 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 HS3ST1O14792 307 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 GUCY1B2O75343 617 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 IFNA2P01563 188 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 KLK1P06870 262 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 THBS1P07996 1170 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 CRABP2P29373 138 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 SUCLG1P53597 346 aaKnown RBP11.48□□□□□ -0.57
RNF40-208ENST00000565995 PNLIPRP2P54317 469 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 ATP5J2P56134 94 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 DMTNQ08495 405 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 GTF2H2Q13888 395 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 EFR3AQ14156 821 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 NNATQ16517 81 aa11.48□□□□□ -0.57
RNF40-208ENST00000565995 TRMT12Q53H54 448 aaKnown RBP11.48□□□□□ -0.57
RNF40-208ENST00000565995 CEP85LQ5SZL2 805 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms