RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SLC10A1Q14973 349 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 RAB35Q15286 201 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 ZIC1Q15915 447 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 SLC39A4Q6P5W5 647 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 CCBE1Q6UXH8 406 aaPredicted RBP3.44□□□□□ -1.86
CHD9-215ENST00000565442 HACD2Q6Y1H2 254 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 ZNF600Q6ZNG1 722 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 LPCAT2Q7L5N7 544 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 NET1Q7Z628 596 aaPredicted RBP3.44□□□□□ -1.86
CHD9-215ENST00000565442 ADCK1Q86TW2 530 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 CDC20BQ86Y33 519 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 MISPQ8IVT2 679 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 CCDC36Q8IYA8 594 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.44□□□□□ -1.86
CHD9-215ENST00000565442 AGAP11Q8TF27 550 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 TBC1D31Q96DN5 1066 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 CCSER1Q9C0I3 900 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 TRPV5Q9NQA5 729 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 TAS2R3Q9NYW6 316 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 KLRF1Q9NZS2 232 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 ATXN10Q9UBB4 475 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 FOXJ3Q9UPW0 622 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 AURKCQ9UQB9 309 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 RNF115Q9Y4L5 304 aa3.44□□□□□ -1.86
CHD9-215ENST00000565442 A0A0U1RQV5 110 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 RNF222A6NCQ9 220 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 ZSCAN5CA6NGD5 496 aaPredicted RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 FBLL1A6NHQ2 334 aaKnown RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 EFCAB7A8K855 629 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 ALOX15BO15296 676 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 PTGER3P43115 390 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 STK19P49842 368 aaPredicted RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 GPC3P51654 580 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 PPIAP62937 165 aaKnown RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 HSF2Q03933 536 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 RUNX3Q13761 415 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 EXOSC2Q13868 293 aaKnown RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 DPYSQ14117 519 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 MICAQ29983 383 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 C15orf32Q32M92 178 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 ZNF774Q6NX45 483 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 LEG1Q6P5S2 330 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 GET4Q7L5D6 327 aaPredicted RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 VPS36Q86VN1 386 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 HPS6Q86YV9 775 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 NFAM1Q8NET5 270 aaPredicted RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 RHOXF1Q8NHV9 184 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 TYMSOSQ8TAI1 123 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 CCDC110Q8TBZ0 833 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 FNDC8Q8TC99 324 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 GIPC3Q8TF64 312 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 TAF4BQ92750 862 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 ART4Q93070 314 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 TADA1Q96BN2 335 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 C11orf24Q96F05 449 aaPredicted RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 RANBP9Q96S59 729 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 APOL2Q9BQE5 337 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 RPAP3Q9H6T3 665 aaPredicted RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 ECT2Q9H8V3 914 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 C1orf123Q9NWV4 160 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 HPF1Q9NWY4 346 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 ANKMY1Q9P2S6 941 aa3.43□□□□□ -1.86
CHD9-215ENST00000565442 ISY1Q9ULR0 285 aaKnown RBP3.43□□□□□ -1.86
CHD9-215ENST00000565442 F8WDY8 70 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 CASKO14936 926 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 LANCL1O43813 399 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 PRAMEF12O95522 483 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 DIRAS3O95661 229 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 IFNB1P01574 187 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 ALPIP09923 528 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 CYP2F1P24903 491 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 RPL34P49207 117 aaKnown RBP3.42□□□□□ -1.86
CHD9-215ENST00000565442 ARHGDIBP52566 201 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 IL9RQ01113 521 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 PRKCEQ02156 737 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 TFDP1Q14186 410 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 UBE2V2Q15819 145 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 SLX4IPQ5VYV7 408 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 P2RY8Q86VZ1 359 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 UNC5CLQ8IV45 518 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 ADIPOR1Q96A54 375 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 ELMO2Q96JJ3 720 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 C9orf85Q96MD7 179 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 DPH5Q9H2P9 285 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 ATP6V1HQ9UI12 483 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 BARX2Q9UMQ3 279 aaPredicted RBP3.42□□□□□ -1.86
CHD9-215ENST00000565442 NTNG1Q9Y2I2 539 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 RALGAPA1Q6GYQ0 2036 aa3.42□□□□□ -1.86
CHD9-215ENST00000565442 CUX2O14529 1486 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 PARD3Q8TEW0 1356 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 BCL2L11O43521 198 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 LCMT2O60294 686 aaKnown RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 IGFBP1P08833 259 aaPredicted RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 NCF1P14598 390 aaPredicted RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 ADRA1AP35348 466 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 CYLC1P35663 651 aaPredicted RBP3.41□□□□□ -1.86
CHD9-215ENST00000565442 PTGFRP43088 359 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 METAP1P53582 386 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
CHD9-215ENST00000565442 RPS6P62753 249 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms