RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 HCFC1P51610 2035 aa12.47□□□□□ -0.41
VPS9D1-204ENST00000565023 INTS1Q8N201 2190 aaKnown RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 PRAMEF25A6NGN4 478 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 FRG2CA6NGY1 282 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 MYO1GB0I1T2 1018 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 ACOX3O15254 700 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 SKAP2O75563 359 aaPredicted RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 BCAS2O75934 225 aaPredicted RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 SNX4O95219 450 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 DRD5P21918 477 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 IL12BP29460 328 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 RFX3P48380 749 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 DCAF7P61962 342 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 PPP2R2AP63151 447 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 EIPR1Q53HC9 387 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 WIPI1Q5MNZ9 446 aaPredicted RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 C1orf185Q5T7R7 199 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 FNDC7Q5VTL7 733 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 RTL6Q6ICC9 239 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 IKBIPQ70UQ0 350 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 SZRD1Q7Z422 152 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 YRDCQ86U90 279 aaKnown RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 OR4N2Q8NGD1 307 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 NEIL3Q8TAT5 605 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 ASB5Q8WWX0 329 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 EFHD2Q96C19 240 aaPredicted RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 SECISBP2Q96T21 854 aaKnown RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 SERHLQ9NQF3 203 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 QPCTLQ9NXS2 382 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 BAIAP2L1Q9UHR4 511 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 EXO1Q9UQ84 846 aaKnown RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 GPR55Q9Y2T6 319 aaPredicted RBP12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 C15orf41Q9Y2V0 281 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 OR10H1Q9Y4A9 318 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 FAM215AQ9Y5M1 114 aa12.46□□□□□ -0.41
VPS9D1-204ENST00000565023 CELSR1Q9NYQ6 3014 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 ICOSLGO75144 302 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 PEX11AO75192 247 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 GLI4P10075 376 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 NAGAP17050 411 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 SDC1P18827 310 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 EFNA1P20827 205 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 CHRNB4P30926 498 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 GPC1P35052 558 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 PTGDSP41222 190 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 CDK9P50750 372 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 WNT3P56703 355 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 OCRLQ01968 901 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 HSPB3Q12988 150 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 PDCD2Q16342 344 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 C6orf136Q5SQH8 315 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 OR5M10Q6IEU7 315 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 MEX3BQ6ZN04 569 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 LARP4Q71RC2 724 aaKnown RBP eCLIP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 ZNF551Q7Z340 670 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 ZNF75CPQ92670 426 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 CIDECQ96AQ7 238 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 TMEM41AQ96HV5 264 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 VSTM2LQ96N03 204 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 COL21A1Q96P44 957 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 ACKR4Q9NPB9 350 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 EQTNQ9NQ60 294 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 DDX18Q9NVP1 670 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 PNPOQ9NVS9 261 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 TAS2R9Q9NYW1 312 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 TAS2R7Q9NYW3 318 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 SH3BP4Q9P0V3 963 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 CAMK2AQ9UQM7 478 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 KIAA1549Q9HCM3 1950 aa12.45□□□□□ -0.42
VPS9D1-204ENST00000565023 A0A0G2JNJ9 132 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 SNPHO15079 494 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 TO15178 435 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 PDPK1O15530 556 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 SCO2O43819 266 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 WDR1O75083 606 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 COQ9O75208 318 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 CT45A8P0DMV1 189 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 CT45A9P0DMV2 189 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 BCKDHAP12694 445 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 PTPN6P29350 595 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 ADH7P40394 386 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 RIPPLY3P57055 190 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 CEBPEQ15744 281 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 SMU1Q2TAY7 513 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 ATP6AP1LQ52LC2 224 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 ZNF385BQ569K4 471 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 CT45A2Q5DJT8 189 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 TIGD3Q6B0B8 471 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 SLC30A6Q6NXT4 461 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 FBXO30Q8TB52 745 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 PPCDCQ96CD2 204 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 TUBGCP3Q96CW5 907 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 TMCO6Q96DC7 493 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 ZNF764Q96H86 408 aaPredicted RBP12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 BTBD9Q96Q07 612 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 RYDENQ9NUL5 291 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms