RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 KDELR3O43731 214 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SNAP29O95721 258 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 BCL10O95999 233 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 IFNW1P05000 195 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CLEC3BP05452 202 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TYRP1P17643 537 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 GABARAPL2P60520 117 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RAB8AP61006 207 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ST3GAL3Q11203 375 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF234Q14588 700 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 HMGN3Q15651 99 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KIAA0930Q6ICG6 404 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 TMEM179BQ7Z7N9 219 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CMTM1Q8IZ96 169 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 STOML3Q8TAV4 291 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SETD7Q8WTS6 366 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 GEMIN6Q8WXD5 167 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 RNF170Q96K19 258 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 COPS8Q99627 209 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ARNT2Q9HBZ2 717 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ASB6Q9NWX5 421 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PLXND1Q9Y4D7 1925 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 OR14I1A6ND48 311 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NAP1L6A6NFF2 107 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PRKD3O94806 890 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SOX14O95416 240 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 F10P00742 488 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TSPAN19P0C672 248 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ACP5P13686 325 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CDK9P50750 372 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 PUDPQ08623 228 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KCNAB2Q13303 367 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 GTF2H2Q13888 395 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 GTF2H2CQ6P1K8 395 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 Q6ZSR9 355 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 VANGL1Q8TAA9 524 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 CEP76Q8TAP6 659 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SLCO4A1Q96BD0 722 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF689Q96CS4 500 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 SPANXDQ9BXN6 97 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SPHK2Q9NRA0 654 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PARPBPQ9NWS1 579 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 IL37Q9NZH6 218 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 OAZ3Q9UMX2 235 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PIKFYVEQ9Y2I7 2098 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 M0QX08 132 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 DLGAP1O14490 977 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SUV39H1O43463 412 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 VAMP5O95183 116 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 IFI6P09912 130 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 HTR5AP47898 357 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CTBP2P56545 445 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PHC1P78364 1004 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SLC7A9P82251 487 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CSTF1Q05048 431 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 ABHD18Q0P651 414 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SERTAD2Q14140 314 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SOWAHCQ53LP3 525 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 CMPK2Q5EBM0 449 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 LIPKQ5VXJ0 399 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PLET1Q6UQ28 207 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ADAMTS16Q8TE57 1224 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 DNAJA4Q8WW22 397 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 FOXN4Q96NZ1 517 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PIGQQ9BRB3 760 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CDADC1Q9BWV3 514 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 B3GAT1Q9P2W7 334 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KCND3Q9UK17 655 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KIR2DS5A0A0G2JLQ3 304 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 A0A0G2JNG1 304 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 A8MVJ9 347 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KIR2DS3K7RE56 304 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 HOXC11O43248 304 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 TIMP1P01033 207 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PNMTP11086 282 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CD82P27701 267 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 MAGEA12P43365 314 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF133P52736 654 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 RPS23P62266 143 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 GPM6BQ13491 265 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KIR2DS5Q14953 304 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NKG7Q16617 165 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 LEXMQ3ZCV2 418 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBCELQ5QJ74 424 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 COX20Q5RI15 118 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PRAMEF13Q5VWM6 474 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ARMC8Q8IUR7 673 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 DNAJC22Q8N4W6 341 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZCCHC10Q8TBK6 192 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 HMGB4Q8WW32 186 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NEIL2Q969S2 332 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TMEM79Q9BSE2 394 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RSPO3Q9BXY4 272 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF385DQ9H6B1 395 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RNPEPL1Q9HAU8 725 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PNO1Q9NRX1 252 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 ADAM29Q9UKF5 820 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 MAGEB17A8MXT2 336 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PSMD9O00233 223 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 GREM1O60565 184 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms