RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 RRAGDQ9NQL2 400 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 SENP1Q9P0U3 644 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 MAPRE3Q9UPY8 281 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 OR10H1Q9Y4A9 318 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 WIF1Q9Y5W5 379 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 AKAP6Q13023 2319 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 H0Y3Z8 333 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 GOLGA8RI6L899 631 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 CRHP06850 196 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 DNASE1P24855 282 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 CRHR1P34998 444 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 CLK3P49761 638 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 DGKQP52824 942 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 IST1P53990 364 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 PSMD4P55036 377 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 DSCR4P56555 118 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 EEFSECP57772 596 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 BTKQ06187 659 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 IMPG1Q17R60 797 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 CFAP157Q5JU67 520 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 FAM71E1Q6IPT2 247 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 FAM180BQ6P0A1 224 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 CHMP1BQ7LBR1 199 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 SLC44A2Q8IWA5 706 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 CCNYL1Q8N7R7 359 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 MBD6Q96DN6 1003 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 RMND5BQ96G75 393 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 TUBA1CQ9BQE3 449 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 IQCGQ9H095 443 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 MYNNQ9NPC7 610 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 ST6GALNAC2Q9UJ37 374 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 ABCG2Q9UNQ0 655 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 C19orf53Q9UNZ5 99 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 TIMM22Q9Y584 194 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 MTORP42345 2549 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
GTF3C1-204ENST00000564664 ABCA4P78363 2273 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 C2orf72A6NCS6 295 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 KDM4EB2RXH2 506 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 NPIPB8E9PQR5 432 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 G3V2L1 256 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 ZIC3O60481 467 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 CRCPO75575 148 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 RSL1D1O76021 490 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 UROSP10746 265 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 PRPH2P23942 346 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 GRK2P25098 689 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 DPP4P27487 766 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 HTR6P50406 440 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 LHX2P50458 406 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 NCBP2P52298 156 aaKnown RBP eCLIP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 GAS1P54826 345 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 DIO3P55073 304 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 CORO7P57737 925 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 OCRLQ01968 901 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 GANABQ14697 944 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 ZNHIT3Q15649 155 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 GLYR1Q49A26 553 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 DCST1Q5T197 706 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 FRMD7Q6ZUT3 714 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 SH2D5Q6ZV89 423 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 TDRPQ86YL5 185 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 C9orf106Q8NAJ2 232 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 OR7G2Q8NG99 324 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 ZNF764Q96H86 408 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 SFXN2Q96NB2 322 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 DACH2Q96NX9 599 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 GPATCH1Q9BRR8 931 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 C3orf14Q9HBI5 128 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 MIEF1Q9NQG6 463 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 OXSMQ9NWU1 459 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 CBLCQ9ULV8 474 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 DOCK7Q96N67 2140 aa11.06□□□□□ -0.64
GTF3C1-204ENST00000564664 CLCA1A8K7I4 914 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 SLC28A1O00337 649 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 UBFD1O14562 309 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 FADS1O60427 444 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 PROCP04070 461 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 FAM153BP0C7A2 387 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 PEPDP12955 493 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 ZNF708P17019 499 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 NTSP30990 170 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 SLCO1A2P46721 670 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 PSG6Q00889 435 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 SRYQ05066 204 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 DECR1Q16698 335 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 FAM153CQ494X1 144 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 OR2A2Q6IF42 318 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 NOXRED1Q6NXP6 359 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 NPSR1Q6W5P4 371 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 RNF165Q6ZSG1 346 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 CDC20BQ86Y33 519 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 OR2L13Q8N349 312 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 FADS6Q8N9I5 356 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 OR4K17Q8NGC6 315 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 ELP4Q96EB1 424 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms