RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TMEM41AQ96HV5 264 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 NODALQ96S42 347 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 ZNF703Q9H7S9 590 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-206ENST00000564557 PROK2Q9HC23 129 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 THAP1Q9NVV9 213 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 ATP6V1HQ9UI12 483 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 CBLCQ9ULV8 474 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 SNX8Q9Y5X2 465 aa12.52□□□□□ -0.41
CNOT1-206ENST00000564557 C15orf38-AP3S2A0A0A6YYH1 394 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 FIGNL2A6NMB9 653 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 AQP7O14520 342 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 CFLARO15519 480 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 EMC8O43402 210 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 ICOSLGO75144 302 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 KCNH1O95259 989 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 CELA3AP09093 270 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 RFPL3SP0C7P2 107 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 G6PDP11413 515 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 GABRA3P34903 492 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 TRPC1P48995 793 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
CNOT1-206ENST00000564557 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 SPDYE7PQ495Y7 208 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 ZNF385BQ569K4 471 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 TIGD3Q6B0B8 471 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 NPSR1Q6W5P4 371 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 HDXQ7Z353 690 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 FGD2Q7Z6J4 655 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 OR7A2PQ8NGA2 310 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 OR5M9Q8NGP3 310 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 RAB3IL1Q8TBN0 382 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 GPR151Q8TDV0 419 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 SLC9A6Q92581 669 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 EFHD2Q96C19 240 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-206ENST00000564557 TLCD1Q96CP7 247 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 SLC35A4Q96G79 324 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 GNRHR2Q96P88 292 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 SORT1Q99523 831 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 NUF2Q9BZD4 464 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 C20orf27Q9GZN8 174 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 MANSC1Q9H8J5 431 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 AKTIPQ9H8T0 292 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 ACKR4Q9NPB9 350 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 SDHAF3Q9NRP4 125 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 PNPOQ9NVS9 261 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 LIPGQ9Y5X9 500 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 ICE1Q9Y2F5 2266 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 FLNCQ14315 2725 aa12.51□□□□□ -0.41
CNOT1-206ENST00000564557 FLNBO75369 2602 aaKnown RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 A0A1B0GVC2 190 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 LRRC3CA6NJW4 275 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 TRPC5OSA6NMA1 111 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 PRSS44E7EML9 344 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 CLDN1O95832 211 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 LAMP1P11279 417 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 LBPP18428 481 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 EFNA1P20827 205 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 PRIM2P49643 509 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 PSG6Q00889 435 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 GAB1Q13480 694 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 CES4AQ5XG92 561 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 DESI1Q6ICB0 168 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 CDRT4Q8N9R6 151 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 OR4N2Q8NGD1 307 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 PHF10Q8WUB8 498 aaKnown RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 OR5P2Q8WZ92 322 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 JADE3Q92613 823 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 MS4A4EQ96PG1 132 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 LMF2Q9BU23 707 aaKnown RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 DUSP26Q9BV47 211 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 DPY30Q9C005 99 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 BHLHE41Q9C0J9 482 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 SLC6A15Q9H2J7 730 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 ZCCHC3Q9NUD5 404 aaKnown RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 PCDHGB4Q9UN71 923 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 C15orf41Q9Y2V0 281 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 DNAJC13O75165 2243 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 ZNF407Q9C0G0 2248 aa12.5□□□□□ -0.41
CNOT1-206ENST00000564557 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
CNOT1-206ENST00000564557 SLCO1B7G3V0H7 640 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 TSPAN2O60636 221 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 WDR1O75083 606 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 CBR3O75828 277 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 ALOX5P09917 674 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 KITP10721 976 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 AGAP20933 346 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 ACVR2AP27037 513 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 FRKP42685 505 aaPredicted RBP12.49□□□□□ -0.41
CNOT1-206ENST00000564557 CDK9P50750 372 aaKnown RBP12.49□□□□□ -0.41
CNOT1-206ENST00000564557 CLDN8P56748 225 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 ART3Q13508 389 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 MLC1Q15049 377 aa12.49□□□□□ -0.41
CNOT1-206ENST00000564557 SF3B4Q15427 424 aaKnown RBP eCLIP12.49□□□□□ -0.412e-10■■■■■ 35.2
CNOT1-206ENST00000564557 ZCCHC12Q6PEW1 402 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms