RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 ANKRD26P1Q6NSI1 321 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 LARP4Q71RC2 724 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLK3-216ENST00000564468 CD163Q86VB7 1156 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 OR1J4Q8NGS1 313 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 MGARPQ8TDB4 240 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 CIDECQ96AQ7 238 aaPredicted RBP12.27□□□□□ -0.45
CLK3-216ENST00000564468 SORT1Q99523 831 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 C1orf50Q9BV19 199 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 OSBPL11Q9BXB4 747 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 ASIC5Q9NY37 505 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 GIMAP2Q9UG22 337 aa12.27□□□□□ -0.45
CLK3-216ENST00000564468 A0A1W2PRB8 838 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 PRAMEF25A6NGN4 478 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 LRRC3CA6NJW4 275 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 FIGNL2A6NMB9 653 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 NPIPA2E9PIF3 369 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 NPIPA3F8WFD2 350 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 SLCO1B7G3V0H7 640 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 EMC8O43402 210 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 TSPAN2O60636 221 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 ICOSLGO75144 302 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 SOX30O94993 753 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 PSMG1O95456 288 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 CLDN8P56748 225 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 CORO7P57737 925 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 PSG6Q00889 435 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 PTGR1Q14914 329 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 ZNF385BQ569K4 471 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 WLSQ5T9L3 541 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 BICRALQ6AI39 1079 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 TIGD3Q6B0B8 471 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 ZCCHC12Q6PEW1 402 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 NPSR1Q6W5P4 371 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 HDXQ7Z353 690 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 FGD2Q7Z6J4 655 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 MRGPRGQ86SM5 289 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 CDRT4Q8N9R6 151 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 NUP43Q8NFH3 380 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 NODALQ96S42 347 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 ADOQ96SZ5 270 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 LMF2Q9BU23 707 aaKnown RBP12.26□□□□□ -0.45
CLK3-216ENST00000564468 C20orf27Q9GZN8 174 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 MANSC1Q9H8J5 431 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 ZNF395Q9H8N7 513 aaPredicted RBP12.26□□□□□ -0.45
CLK3-216ENST00000564468 AKTIPQ9H8T0 292 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 NTMQ9P121 344 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 ACAD8Q9UKU7 415 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 CBLCQ9ULV8 474 aa12.26□□□□□ -0.45
CLK3-216ENST00000564468 PCNX3Q9H6A9 2034 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 C2CD3Q4AC94 2353 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 TRPC5OSA6NMA1 111 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 SNPHO15079 494 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 CBR3O75828 277 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 TRAPPC6AO75865 159 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 KCNH1O95259 989 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 CLDN1O95832 211 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 HOXD4P09016 255 aaPredicted RBP12.25□□□□□ -0.45
CLK3-216ENST00000564468 RFPL3SP0C7P2 107 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 G6PDP11413 515 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 LBPP18428 481 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 GCKP35557 465 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 PRIM2P49643 509 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 CLK3P49761 638 aaKnown RBP12.25□□□□□ -0.45
CLK3-216ENST00000564468 PRKAG1P54619 331 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 C21orf58P58505 322 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 ART3Q13508 389 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 TOMM20Q15388 145 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 GXYLT1Q4G148 440 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 ANGPTL8Q6UXH0 198 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 OR7A2PQ8NGA2 310 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 NEIL3Q8TAT5 605 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 OR5P2Q8WZ92 322 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 NTNG2Q96CW9 530 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 COQ8BQ96D53 544 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 PPP1R36Q96LQ0 422 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 MS4A4EQ96PG1 132 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 NUF2Q9BZD4 464 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 BHLHE41Q9C0J9 482 aaPredicted RBP12.25□□□□□ -0.45
CLK3-216ENST00000564468 MEAF6Q9HAF1 191 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 HHATLQ9HCP6 504 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 NEUROD4Q9HD90 331 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 SDHAF3Q9NRP4 125 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 COQ3Q9NZJ6 369 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 C15orf41Q9Y2V0 281 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 PCDHGB3Q9Y5G1 929 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 KLF2Q9Y5W3 355 aaPredicted RBP12.25□□□□□ -0.45
CLK3-216ENST00000564468 LIPGQ9Y5X9 500 aa12.25□□□□□ -0.45
CLK3-216ENST00000564468 FBN2P35556 2912 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 GNB5O14775 395 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 HDAC3O15379 428 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 WDR1O75083 606 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 SNNO75324 88 aaPredicted RBP12.24□□□□□ -0.45
CLK3-216ENST00000564468 HPNP05981 417 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 CELA3AP09093 270 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 LAMP1P11279 417 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 GABRA1P14867 456 aa12.24□□□□□ -0.45
CLK3-216ENST00000564468 GABRA3P34903 492 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms