RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 SNTB1Q13884 538 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 BCL2A1Q16548 175 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 PRSS53Q2L4Q9 553 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 CCDC153Q494R4 210 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 CYP27C1Q4G0S4 372 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 EEF1A1P5Q5VTE0 462 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 AAGABQ6PD74 315 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 SCIMPQ6UWF3 145 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 LARP4Q71RC2 724 aaKnown RBP eCLIP15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 IFNEQ86WN2 208 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 TDRPQ86YL5 185 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 CCNYL1Q8N7R7 359 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 OR14L1PQ8NHC6 308 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 RDH11Q8TC12 318 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 NRGNQ92686 78 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 BBS4Q96RK4 519 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 GPATCH1Q9BRR8 931 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 SFXN3Q9BWM7 321 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 EBPLQ9BY08 206 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 CLEC4MQ9H2X3 399 aaPredicted RBP15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 PPCSQ9HAB8 311 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 TBK1Q9UHD2 729 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 FBXL2Q9UKC9 423 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 CBLCQ9ULV8 474 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 C19orf53Q9UNZ5 99 aaPredicted RBP15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 CCL27Q9Y4X3 112 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 KIAA1549Q9HCM3 1950 aa15.63■□□□□ 0.09
VPS9D1-203ENST00000563798 B4DXG7 233 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 ZIC3O60481 467 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 PLIN3O60664 434 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 COQ9O75208 318 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 NME6O75414 186 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 RSL1D1O76021 490 aaKnown RBP15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 TMIGD3P0DMS9 266 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 EPXP11678 715 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 ZNF708P17019 499 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 PRPH2P23942 346 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 GRK2P25098 689 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 IL12BP29460 328 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 CRHR1P34998 444 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 BTKQ06187 659 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 C2orf80Q0P641 193 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 SPDYAQ5MJ70 313 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 IKBIPQ70UQ0 350 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 SLC44A2Q8IWA5 706 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 OR2L13Q8N349 312 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 RHOXF2Q9BQY4 288 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 ACBD3Q9H3P7 528 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 CLCF1Q9UBD9 225 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 ST6GALNAC2Q9UJ37 374 aa15.62■□□□□ 0.09
VPS9D1-203ENST00000563798 DOCK7Q96N67 2140 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 TUBAL3A6NHL2 446 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 CLCA1A8K7I4 914 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 H0Y3Z8 333 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 HCRTR2O43614 444 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 FADS1O60427 444 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 TACR1P25103 407 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 CCT5P48643 541 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 PCYT1AP49585 367 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 CLDN18P56856 261 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 B3GALT5-AS1P59052 145 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 FOXF2Q12947 444 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 KIAA0040Q15053 153 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 RNF165Q6ZSG1 346 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 CDC20BQ86Y33 519 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 FADS6Q8N9I5 356 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 OR4N2Q8NGD1 307 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 ZNF764Q96H86 408 aaPredicted RBP15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 RRAGDQ9NQL2 400 aaPredicted RBP15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 OXSMQ9NWU1 459 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 SENP1Q9P0U3 644 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 EDARQ9UNE0 448 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 ABCG2Q9UNQ0 655 aa15.61■□□□□ 0.09
VPS9D1-203ENST00000563798 C2CD3Q4AC94 2353 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 ITPR3Q14573 2671 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 UPK1AO00322 258 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 JUNP05412 331 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 UROSP10746 265 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 DPP4P27487 766 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 MC3RP41968 323 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 STARP49675 285 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 NCBP2P52298 156 aaKnown RBP eCLIP15.6■□□□□ 0.096e-6■■□□□ 11.7
VPS9D1-203ENST00000563798 DGKQP52824 942 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 DSCR4P56555 118 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 GAB1Q13480 694 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 IMPG1Q17R60 797 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 NOXRED1Q6NXP6 359 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 EFHD2Q96C19 240 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 MBD6Q96DN6 1003 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 ELP4Q96EB1 424 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 RMND5BQ96G75 393 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 SFXN2Q96NB2 322 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 AMDHD1Q96NU7 426 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 LMF2Q9BU23 707 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 PIGMQ9H3S5 423 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 LIME1Q9H400 295 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 GLIPR2Q9H4G4 154 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 TNFRSF12AQ9NP84 129 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 MIEF1Q9NQG6 463 aa15.6■□□□□ 0.09
VPS9D1-203ENST00000563798 OR10H1Q9Y4A9 318 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms