RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GBA3Q9H227 469 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 PRDM13Q9H4Q3 707 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 C10orf88Q9H8K7 445 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 GALNT9Q9HCQ5 603 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 LCMT1Q9UIC8 334 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 HYOU1Q9Y4L1 999 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 hCG_1818297A0A087WSY0 165 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 KLF11O14901 512 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 DEAF1O75398 565 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 TCEA1P23193 301 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 MARCKSL1P49006 195 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 NPY2RP49146 381 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 ATP4BP51164 291 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 RAB38P57729 211 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 STX4Q12846 297 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 SERTAD2Q14140 314 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 EBPQ15125 230 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 TCEAL1Q15170 157 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 SGCBQ16585 318 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF620Q6ZNG0 422 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 PID1Q7Z2X4 250 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 PLCZ1Q86YW0 608 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 TREML1Q86YW5 311 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 ZCCHC24Q8N2G6 241 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 FAM47BQ8NA70 645 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 ADAMTS16Q8TE57 1224 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 CTNNBL1Q8WYA6 563 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF665Q9H7R5 613 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 KLHL8Q9P2G9 620 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 DKKL1Q9UK85 242 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 FBXL2Q9UKC9 423 aa9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 R3HDM2Q9Y2K5 976 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-204ENST00000563790 HMX2A2RU54 273 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 ZNF814B7Z6K7 855 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 C4orf51C9J302 202 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 ATP6V1G2-DDX39BF2Z307 99 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 M0R1B8 84 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 HRKO00198 91 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 CYR61O00622 381 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 GGT1P19440 569 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 RBL1P28749 1068 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 EGFEM1PQ0D2K5 195 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 LAPTM4AQ15012 233 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 ZNF311Q5JNZ3 666 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 Q6ZT83 130 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 Q6ZTK2 550 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 TRIM58Q8NG06 486 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 KTI12Q96EK9 354 aaPredicted RBP9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 CDKN2AIPNLQ96HQ2 116 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 FBXL20Q96IG2 436 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 DNAJC7Q99615 494 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 NPLQ9BXD5 320 aaPredicted RBP9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 DDX47Q9H0S4 455 aaKnown RBP9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 CENPHQ9H3R5 247 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 SNX15Q9NRS6 342 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 NLE1Q9NVX2 485 aaPredicted RBP9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 ZNF337Q9Y3M9 751 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 SLC25A15Q9Y619 301 aa9.14□□□□□ -0.95
HDGFL3-204ENST00000563790 MDFIC2A0A1B0GVS7 189 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 URADA6NGE7 173 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 SMTNL1A8MU46 457 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 COX7A2P14406 83 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 COMTP21964 271 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 PSMB4P28070 264 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 SLAMF1Q13291 335 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 HERPUD1Q15011 391 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 SH2D4BQ5SQS7 431 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 LHFPL2Q6ZUX7 228 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 BBS12Q6ZW61 710 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 SPATA19Q7Z5L4 167 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 STRA8Q7Z7C7 330 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 KRT222Q8N1A0 295 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 RIBC1Q8N443 379 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 DEFB108BQ8NET1 73 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 FAM110BQ8TC76 370 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 HAUS1Q96CS2 278 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 RAB39BQ96DA2 213 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 MAK16Q9BXY0 300 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 TSPY26PQ9H489 355 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 TOR3AQ9H497 397 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 GOLPH3Q9H4A6 298 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 C16orf95Q9H693 158 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 MARCH7Q9H992 704 aa9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 DDX56Q9NY93 547 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 SOX21Q9Y651 276 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-204ENST00000563790 HACD1B0YJ81 288 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 PIP5K1BO14986 540 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 ANGPTL7O43827 346 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 AIFM1O95831 613 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 SERPIND1P05546 499 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 ABCB1P08183 1280 aaPredicted RBP9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 COX5AP20674 150 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 HNF4AP41235 474 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 SLC1A1P43005 524 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 GEMP55040 296 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 TMEM33P57088 247 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 GUCA2AQ02747 115 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 NFYCQ13952 458 aa9.12□□□□□ -0.95
HDGFL3-204ENST00000563790 TFDP2Q14188 446 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms