RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FARSBQ9NSD9 589 aaKnown RBP16.86■□□□□ 0.29
NME3-204ENST00000563498 UTS2RQ9UKP6 389 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 SNX6Q9UNH7 406 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 HIVEP2P31629 2446 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 TRIM64A6NGJ6 449 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 TRIM64BA6NI03 449 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 B4DXG7 233 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 C16orf97H3BN30 126 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 LINC01387J3KSC0 135 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 SMAD7O15105 426 aaKnown RBP16.85■□□□□ 0.29
NME3-204ENST00000563498 SMIM24O75264 130 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 TNFRSF21O75509 655 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 OTCP00480 354 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 PDYNP01213 254 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 CGAP01215 116 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 RPS17P08708 135 aaKnown RBP16.85■□□□□ 0.29
NME3-204ENST00000563498 CD8BP10966 210 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 IL12BP29460 328 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 ALDH9A1P49189 494 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 CORO7P57737 925 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 FAM180BQ6P0A1 224 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 SAMD14Q8IZD0 417 aaPredicted RBP16.85■□□□□ 0.29
NME3-204ENST00000563498 C1orf52Q8N6N3 182 aaKnown RBP16.85■□□□□ 0.29
NME3-204ENST00000563498 OR4K17Q8NGC6 315 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 CAVIN3Q969G5 261 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 PERPQ96FX8 193 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 ZNF845Q96IR2 970 aaPredicted RBP16.85■□□□□ 0.29
NME3-204ENST00000563498 OPN3Q9H1Y3 402 aaPredicted RBP16.85■□□□□ 0.29
NME3-204ENST00000563498 XPR1Q9UBH6 696 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 HEY2Q9UBP5 337 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 ZNF175Q9Y473 711 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 RAI1Q7Z5J4 1906 aaPredicted RBP16.85■□□□□ 0.29
NME3-204ENST00000563498 TLN2Q9Y4G6 2542 aa16.85■□□□□ 0.29
NME3-204ENST00000563498 LOXP28300 417 aaPredicted RBP16.84■□□□□ 0.29
NME3-204ENST00000563498 MAGEA12P43365 314 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 PPP2R2BQ00005 443 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 OCRLQ01968 901 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 C2orf54Q08AI8 447 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 TRADDQ15628 312 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 UAP1Q16222 522 aaPredicted RBP16.84■□□□□ 0.29
NME3-204ENST00000563498 ERCC6LQ2NKX8 1250 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 LETMD1Q6P1Q0 360 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 NPSR1Q6W5P4 371 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 CCDC116Q8IYX3 515 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 FADS6Q8N9I5 356 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 FIG4Q92562 907 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 HS3ST6Q96QI5 342 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 RNF122Q9H9V4 155 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 TRPS1Q9UHF7 1281 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 MCM8Q9UJA3 840 aa16.84■□□□□ 0.29
NME3-204ENST00000563498 ZANQ9Y493 2812 aa16.83■□□□□ 0.29
NME3-204ENST00000563498 HSD3B1P14060 373 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 PAX1P15863 534 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 TCEA1P23193 301 aaKnown RBP16.83■□□□□ 0.28
NME3-204ENST00000563498 HSD3B2P26439 372 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 KCNJ5P48544 419 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 CLDN15P56746 228 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 GANABQ14697 944 aaKnown RBP16.83■□□□□ 0.28
NME3-204ENST00000563498 TSNAXIP1Q2TAA8 658 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 UBQLNLQ8IYU4 475 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 OR9A2Q8NGT5 310 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 SPATA3Q8NHX4 192 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 ZNF483Q8TF39 744 aaPredicted RBP16.83■□□□□ 0.28
NME3-204ENST00000563498 IGFBPL1Q8WX77 278 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 C1QTNF3Q9BXJ4 246 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 ACSS3Q9H6R3 686 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 ANKRA2Q9H9E1 313 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 FOLH1BQ9HBA9 442 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 PFDN4Q9NQP4 134 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 PPP4R1LQ9P1A2 415 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 VPS29Q9UBQ0 182 aa16.83■□□□□ 0.28
NME3-204ENST00000563498 INAFM1C9JVW0 142 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 PLOD3O60568 738 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 TMCC2O75069 709 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 CNOT4O95628 575 aaKnown RBP16.82■□□□□ 0.28
NME3-204ENST00000563498 ESRRBO95718 433 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 COL6A2P12110 1019 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 EVI2BP34910 448 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 PHBP35232 272 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 PTH2RP49190 550 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 SIRPAP78324 504 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 GUSBP1Q15486 140 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 RAET1LQ5VY80 246 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 ZNF550Q7Z398 422 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 OR2M3Q8NG83 312 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 KAT2AQ92830 837 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 EFHD2Q96C19 240 aaPredicted RBP16.82■□□□□ 0.28
NME3-204ENST00000563498 PINK1Q9BXM7 581 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 SHCBP1LQ9BZQ2 653 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 STMN4Q9H169 189 aaPredicted RBP16.82■□□□□ 0.28
NME3-204ENST00000563498 DSN1Q9H410 356 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 SDHAF3Q9NRP4 125 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 TAS2R9Q9NYW1 312 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 ABCG2Q9UNQ0 655 aa16.82■□□□□ 0.28
NME3-204ENST00000563498 CSPG4Q6UVK1 2322 aa16.81■□□□□ 0.28
NME3-204ENST00000563498 DSCAMO60469 2012 aa16.81■□□□□ 0.28
NME3-204ENST00000563498 PPP6CO00743 305 aa16.81■□□□□ 0.28
NME3-204ENST00000563498 NME6O75414 186 aaPredicted RBP16.81■□□□□ 0.28
NME3-204ENST00000563498 HK1P19367 917 aa16.81■□□□□ 0.28
NME3-204ENST00000563498 TBXA2RP21731 343 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms