RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 GEMP55040 296 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CDH6P55285 790 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 GSCP56915 257 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 FAM27E3Q08E93 113 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 SIGLEC14Q08ET2 396 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF415Q09FC8 603 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ELAVL2Q12926 359 aaKnown RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 LINC01620Q4KN68 170 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 C6orf183Q5T699 404 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM225Q6GV28 225 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 OR2A2Q6IF42 318 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 FAM173BQ6P4H8 233 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 TRMT10CQ7L0Y3 403 aaKnown RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 FAM124AQ86V42 546 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 GPBP1Q86WP2 473 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 PYROXD2Q8N2H3 581 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 RYBPQ8N488 228 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 HORMAD2Q8N7B1 307 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 RNF149Q8NC42 400 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 OR10Q1Q8NGQ4 319 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF398Q8TD17 642 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 SCFD1Q8WVM8 642 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 DNAJB3Q8WWF6 145 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 CDKL2Q92772 493 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 PBKQ96KB5 322 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 VSTM2LQ96N03 204 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ACCSQ96QU6 501 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 NDNQ99608 321 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 RBM4BQ9BQ04 359 aaKnown RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM246Q9BRR3 403 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 HAUS8Q9BT25 410 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ST6GALNAC5Q9BVH7 336 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 RBM4Q9BWF3 364 aaKnown RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 FUNDC2Q9BWH2 189 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 RBM24Q9BX46 236 aaKnown RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 FAM49AQ9H0Q0 323 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 GAL3ST2Q9H3Q3 398 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 RIMS4Q9H426 269 aaPredicted RBP4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 OLFML3Q9NRN5 406 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM74BQ9NUR3 256 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 BCAP29Q9UHQ4 241 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ENPP5Q9UJA9 477 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ADAM28Q9UKQ2 775 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 PADI3Q9ULW8 664 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 NME7Q9Y5B8 376 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 RLFQ13129 1914 aa4.76□□□□□ -1.65
VPS35P1-201ENST00000563400 ATXN2Q99700 1313 aaKnown RBP4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 PLXNA1Q9UIW2 1896 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CEP350Q5VT06 3117 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 TRAV18A0A075B6X5 111 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 IGKV6-21A0A0C4DH24 114 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 A0A1B0GUH1 482 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 WDR27A2RRH5 827 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 LRRIQ3A6PVS8 624 aaPredicted RBP4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 C9JVG2 144 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 H0YIZ8 118 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 MDM4O15151 490 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 SCO2O43819 266 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 NXPH3O95157 252 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CCNE2O96020 404 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 EPOP01588 193 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 NPSP0C0P6 89 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 DARSP14868 501 aaKnown RBP4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 GSTM3P21266 225 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 FCARP24071 287 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CHATP28329 748 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 RRM2P31350 389 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CCT3P49368 545 aaKnown RBP4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 RAD23BP54727 409 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 SKP1P63208 163 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 TNNC1P63316 161 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 FOXM1Q08050 763 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 LAMTOR4Q0VGL1 99 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 MYBPHQ13203 477 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CA9Q16790 459 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 PDZK1Q5T2W1 519 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 RESP18Q5W5W9 173 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM65Q6PI78 240 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 VSTM1Q6UX27 236 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 HSDL2Q6YN16 418 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CENPUQ71F23 418 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 FOXRED2Q8IWF2 684 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 GPR65Q8IYL9 337 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 SELENOHQ8IZQ5 122 aaKnown RBP4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 GCSAMQ8N6F7 178 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 ALLCQ8N6M5 410 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 ACVR1CQ8NER5 493 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CACNG8Q8WXS5 425 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 ELMO1Q92556 727 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 LHX4Q969G2 390 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 ADIPOR1Q96A54 375 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 PTCD3Q96EY7 689 aaKnown RBP4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 PPP1R16AQ96I34 528 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 CENPKQ9BS16 269 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 ALG8Q9BVK2 526 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 VCX3BQ9H321 246 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 ZFP57Q9NU63 452 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 SMPD4Q9NXE4 827 aa4.75□□□□□ -1.65
VPS35P1-201ENST00000563400 PIPOXQ9P0Z9 390 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms