RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 DNAJB6O75190 326 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 GCM2O75603 506 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 DNAJB5O75953 348 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 MFN2O95140 757 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 MED26O95402 600 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 OPN1SWP03999 348 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 GUSBP08236 651 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 RHCEP18577 417 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 FPR1P21462 350 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 NME2P22392 152 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 KCNJ5P48544 419 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 CRYBA2P53672 197 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 RAD23AP54725 363 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SMIM11AP58511 58 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 VLDLRP98155 873 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 MAT1AQ00266 395 aaKnown RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ID2Q02363 134 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 C19orf57Q0VDD7 668 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ILKQ13418 452 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 DAG1Q14118 895 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SYPL1Q16563 259 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 NRF1Q16656 503 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ARHGAP11BQ3KRB8 267 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 EIPR1Q53HC9 387 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 PHF19Q5T6S3 580 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 HEPHL1Q6MZM0 1159 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SHQ1Q6PI26 577 aaKnown RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF574Q6ZN55 896 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 GALNT10Q86SR1 603 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 STK32CQ86UX6 486 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 EPHX4Q8IUS5 362 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SLITRK4Q8IW52 837 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 DMRTC2Q8IXT2 367 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 AGBL5Q8NDL9 886 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 CHDHQ8NE62 594 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 OR7G1Q8NGA0 311 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 OR2I1PQ8NGU4 316 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 FAM110BQ8TC76 370 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SLC9A6Q92581 669 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 C7orf34Q96L11 122 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF570Q96NI8 536 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 COL21A1Q96P44 957 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 OR6C1Q96RD1 312 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 YIPF2Q9BWQ6 316 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 PINK1Q9BXM7 581 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 GABARAPL1Q9H0R8 117 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ARMC7Q9H6L4 198 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 NTN4Q9HB63 628 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ADAP2Q9NPF8 381 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 SIDT1Q9NXL6 827 aaKnown RBP9.04□□□□□ -0.96
UBFD1-202ENST00000563366 PRODH2Q9UF12 536 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 IFT52Q9Y366 437 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 AP4B1Q9Y6B7 739 aa9.04□□□□□ -0.96
UBFD1-202ENST00000563366 ASXL3Q9C0F0 2248 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 A8MVJ9 347 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 H0YAE9 185 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 hCG_2039718K7EN88 272 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 ACOX3O15254 700 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 LRP3O75074 770 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 STX11O75558 287 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 SCRG1O75711 98 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 H6PDO95479 791 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 IFNA16P05015 189 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 ALPPP05187 535 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 FESP07332 822 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF806P0C7X5 589 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 PRKAR1BP31321 381 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 IFNA8P32881 189 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 RORAP35398 523 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 DCTP40126 519 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 PSPHP78330 225 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 POU6F2P78424 691 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 OCA2Q04671 838 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF155Q12901 538 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 LARS2Q15031 903 aaKnown RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 ELAVL1Q15717 326 aaKnown RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 ZSWIM7Q19AV6 140 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 TRMT12Q53H54 448 aaKnown RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 EXOSC6Q5RKV6 272 aaKnown RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 MFSD4BQ5TF39 518 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 PEX5LQ8IYB4 626 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 MARVELD2Q8N4S9 558 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 METTL27Q8N6F8 245 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 COX18Q8N8Q8 333 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 SLC16A11Q8NCK7 471 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 MAGEE2Q8TD90 523 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 OIT3Q8WWZ8 545 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 HOXB13Q92826 284 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 CLIP3Q96DZ5 547 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 C16orf58Q96GQ5 468 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 PTCHD1Q96NR3 888 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF300Q96RE9 604 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 CDC6Q99741 560 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 PIP5K1AQ99755 562 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 YIPF4Q9BSR8 244 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 MTHFD2LQ9H903 347 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-202ENST00000563366 LANCL2Q9NS86 450 aa9.03□□□□□ -0.96
UBFD1-202ENST00000563366 KIF17Q9P2E2 1029 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms