RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 RNASET2O00584 256 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 ATP8B1O43520 1251 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 FADS1O60427 444 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 EDF1O60869 148 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 DIAPH2O60879 1101 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 ICOSLGO75144 302 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 REM1O75628 298 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 HMGN2P05204 90 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 STSP08842 583 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 CYP4B1P13584 511 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 CD1EP15812 388 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 DDX5P17844 614 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 GABRA3P34903 492 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 MAGEA5P43359 124 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 KIR3DL1P43629 444 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 CCT3P49368 545 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 MRPL19P49406 292 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 TMED10P49755 219 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 DGKQP52824 942 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 CLNS1AP54105 237 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 PNLIPRP2P54317 469 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 PRKAG1P54619 331 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 AQP5P55064 265 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 PSPHP78330 225 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 DUSP5Q16690 384 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 FAM174BQ3ZCQ3 159 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 PDCD4Q53EL6 469 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 KRTCAP3Q53RY4 240 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 NXNQ6DKJ4 435 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 BNC2Q6ZN30 1099 aaPredicted RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 Q6ZPB1 254 aaPredicted RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 GK5Q6ZS86 529 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 ZAR1Q86SH2 424 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 CLEC4FQ8N1N0 589 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 CDRT4Q8N9R6 151 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 WDSUB1Q8N9V3 476 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 CEP70Q8NHQ1 597 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 FBXO30Q8TB52 745 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 PRR7Q8TB68 274 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 SFXN5Q8TD22 340 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 PIK3R3Q92569 461 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 EFHD2Q96C19 240 aaPredicted RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 OTUB1Q96FW1 271 aaPredicted RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 RILPQ96NA2 401 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 MS4A4EQ96PG1 132 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 YIPF4Q9BSR8 244 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 DOHHQ9BU89 302 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 RTN4RQ9BZR6 473 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 DEFB127Q9H1M4 99 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 UBQLN3Q9H347 655 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 ACBD3Q9H3P7 528 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 SERHL2Q9H4I8 314 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 ZNF703Q9H7S9 590 aaPredicted RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 C3orf14Q9HBI5 128 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 GALNT9Q9HCQ5 603 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 ZFP64Q9NPA5 681 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 SDR39U1Q9NRG7 319 aaPredicted RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 ZCCHC3Q9NUD5 404 aaKnown RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 FBXO34Q9NWN3 711 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 ERRFI1Q9UJM3 462 aaPredicted RBP7.82□□□□□ -1.16
UBR1-204ENST00000563239 CBLCQ9ULV8 474 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 MAPRE3Q9UPY8 281 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 SNX8Q9Y5X2 465 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 LIPGQ9Y5X9 500 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 KCNE3Q9Y6H6 103 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 HIVEP3Q5T1R4 2406 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 SPTAN1Q13813 2472 aaKnown RBP7.81□□□□□ -1.16
UBR1-204ENST00000563239 USP9YO00507 2555 aaPredicted RBP7.81□□□□□ -1.16
UBR1-204ENST00000563239 SVILO95425 2214 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 A0A1B0GTH9 108 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 A0A1B0GVC2 190 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 WIPF3A6NGB9 483 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 PRAMEF25A6NGN4 478 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 TTC36A6NLP5 189 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 E9PBE3 544 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 TFECO14948 347 aaPredicted RBP7.81□□□□□ -1.16
UBR1-204ENST00000563239 UBDO15205 165 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 PDE9AO76083 593 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 SNX4O95219 450 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 IL33O95760 270 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 IGHG3P01860 377 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 IDO1P14902 403 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 PTPN6P29350 595 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 KCNJ2P63252 427 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 MRPS22P82650 360 aaKnown RBP7.81□□□□□ -1.16
UBR1-204ENST00000563239 PRR5P85299 388 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 PLGLB1Q02325 96 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 SNTA1Q13424 505 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 LASP1Q14847 261 aaKnown RBP7.81□□□□□ -1.16
UBR1-204ENST00000563239 GSTA3Q16772 222 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 TBCELQ5QJ74 424 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 SLC30A6Q6NXT4 461 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 ZCCHC12Q6PEW1 402 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 PAOXQ6QHF9 649 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 APOOLQ6UXV4 268 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 SLC22A16Q86VW1 577 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 ANKRD46Q86W74 232 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 FUNDC1Q8IVP5 155 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 OR56A1Q8NGH5 318 aa7.81□□□□□ -1.16
UBR1-204ENST00000563239 OR9I1Q8NGQ6 314 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms