RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 PELOQ9BRX2 385 aaKnown RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 LMF2Q9BU23 707 aaKnown RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 PINK1Q9BXM7 581 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF350Q9GZX5 532 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 GABARAPL1Q9H0R8 117 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 MTHFD2LQ9H903 347 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 MKKSQ9NPJ1 570 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 TMEFF2Q9UIK5 374 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 HCN4Q9Y3Q4 1203 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 WDR45Q9Y484 360 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 A8MUA0 341 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 C17orf105B2RV13 164 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 M0R3H8 397 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 HS6ST1O60243 411 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 GNAO1P09471 354 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 DAPP51397 102 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 CDH12P55289 794 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 FOXL2P58012 376 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 HPCAP84074 193 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 SPIBQ01892 262 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 TRA2AQ13595 282 aaKnown RBP eCLIP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 GANABQ14697 944 aaKnown RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 CYP4Z1Q86W10 505 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 TMEM151BQ8IW70 566 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 DHRSXQ8N5I4 330 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF615Q8N8J6 731 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 SUMF1Q8NBK3 374 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 CYGBQ8WWM9 190 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 SENP5Q96HI0 755 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF578Q96N58 590 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ANKRD60Q9BZ19 345 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 VN1R1Q9GZP7 353 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 OR10A5Q9H207 317 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ACER3Q9NUN7 267 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 RHCGQ9UBD6 479 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 SATB2Q9UPW6 733 aa16.78■□□□□ 0.28
COMMD4-208ENST00000563220 FAM32AQ9Y421 112 aaKnown RBP16.78■□□□□ 0.28
COMMD4-208ENST00000563220 ADARB1P78563 741 aaKnown RBP16.77■□□□□ 0.27
COMMD4-208ENST00000563220 NKAIN1Q4KMZ8 207 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 LIN52Q52LA3 116 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 FIGNL1Q6PIW4 674 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 BMPERQ8N8U9 685 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 OR4N2Q8NGD1 307 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 OR52P1PQ8NH57 321 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 C16orf52Q8NHV5 167 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 CLIP3Q96DZ5 547 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 SAP130Q9H0E3 1048 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 TOR3AQ9H497 397 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 MKL2Q9ULH7 1088 aa16.77■□□□□ 0.27
COMMD4-208ENST00000563220 ASCC3Q8N3C0 2202 aaKnown RBP16.77■□□□□ 0.27
COMMD4-208ENST00000563220 CENPVL1A0A0U1RR11 272 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 TCRBV16S1A1N1A0A5B0 115 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 MITFO75030 526 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-208ENST00000563220 CLIC3O95833 236 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 FGF5P12034 268 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 RORAP35398 523 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 CAPGP40121 348 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 LIMS1P48059 325 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 HMGA2P52926 109 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 NUBP1P53384 320 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 POU6F2P78424 691 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-208ENST00000563220 GPR68Q15743 365 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF385CQ66K41 422 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-208ENST00000563220 NPSR1Q6W5P4 371 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 DEF8Q6ZN54 512 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF321PQ8N8H1 164 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 OR6T1Q8NGN1 323 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 ZFAND2BQ8WV99 257 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 FBXL20Q96IG2 436 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 TGIF2Q9GZN2 237 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 KCND3Q9UK17 655 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 GPR55Q9Y2T6 319 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-208ENST00000563220 IGLV3-12A0A075B6K2 115 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 PRAMEF2O60811 474 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 STX11O75558 287 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 KCNK2O95069 426 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 CCL4P13236 92 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 NSDHLQ15738 373 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 MAPK14Q16539 360 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 EXOC3L2Q2M3D2 409 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 KDM4DQ6B0I6 523 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 ISLR2Q6UXK2 745 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 SHISA6Q6ZSJ9 500 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 ZAR1Q86SH2 424 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 CLIP4Q8N3C7 705 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 AGBL5Q8NDL9 886 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 STT3BQ8TCJ2 826 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 RMND5BQ96G75 393 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-208ENST00000563220 MBOAT4Q96T53 435 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 NDUFA13Q9P0J0 144 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 KCNE5Q9UJ90 142 aa16.76■□□□□ 0.27
COMMD4-208ENST00000563220 FER1L5A0AVI2 2057 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 NPIPA5A0A0B4J1W7 369 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 AGAP5A6NIR3 686 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 CLDN24A6NM45 220 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 PRR33A8MZF0 331 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 NPIPA7E9PJI5 369 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 SYT5O00445 386 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 PCDH17O14917 1159 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 AK1P00568 194 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms