RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 CEBPGP53567 150 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 CRYBB1P53674 252 aaPredicted RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 MLLT10P55197 1068 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 PRPS1P60891 318 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ESRRGP62508 458 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 PSPHP78330 225 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ELP6Q0PNE2 266 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 GALNT2Q10471 571 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 BNIP2Q12982 314 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 TSPAN31Q12999 210 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 PRKAA1Q13131 559 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ASAH1Q13510 395 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ZNHIT3Q15649 155 aaPredicted RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 UAP1Q16222 522 aaPredicted RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 PNLIPRP3Q17RR3 467 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 SLC5A12Q1EHB4 618 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 RNF212Q495C1 297 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ZFP69Q49AA0 526 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ZBED5Q49AG3 693 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 GPR33Q49SQ1 333 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 TMEM35AQ53FP2 167 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 HSD17B12Q53GQ0 312 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ZNF766Q5HY98 468 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 DNLZQ5SXM8 178 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 RPL13AP3Q6NVV1 102 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 RGMBQ6NW40 437 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 SLC22A25Q6T423 547 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 LCTLQ6UWM7 567 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 RRM2BQ7LG56 351 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 OTOAQ7RTW8 1153 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 SMIM15Q7Z3B0 74 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 TRMT11Q7Z4G4 463 aaKnown RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 ARID3BQ8IVW6 561 aaPredicted RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 C1orf87Q8N0U7 546 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ZCCHC7Q8N3Z6 543 aaKnown RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 ZBTB2Q8N680 514 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 LRRC17Q8N6Y2 441 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 MRPL43Q8N983 215 aaKnown RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 ZNF248Q8NDW4 579 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 OR5M1Q8NGP8 315 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 KCNG4Q8TDN1 519 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ING5Q8WYH8 240 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 THRSPQ92748 146 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 WBP2Q969T9 261 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ECHDC3Q96DC8 303 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 ALG14Q96F25 216 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 CALML4Q96GE6 196 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 C10orf90Q96M02 699 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 CDCA3Q99618 268 aaPredicted RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 ACBD6Q9BR61 282 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 MED18Q9BUE0 208 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 MND1Q9BWT6 205 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 GLIS2Q9BZE0 524 aaPredicted RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 GPR63Q9BZJ6 419 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 THAP2Q9H0W7 228 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 FOLH1BQ9HBA9 442 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 MRPL47Q9HD33 250 aaKnown RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 XPNPEP1Q9NQW7 623 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 CTPS2Q9NRF8 586 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.23□□□□□ -1.73
CHD9-206ENST00000562791 BABAM2Q9NXR7 383 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 COQ3Q9NZJ6 369 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 BFARQ9NZS9 450 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 LSM4Q9Y4Z0 139 aaKnown RBP4.23□□□□□ -1.73
CHD9-206ENST00000562791 HSPE1-MOB4S4R3N1 261 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 USP47Q96K76 1375 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 MED14O60244 1454 aa4.23□□□□□ -1.73
CHD9-206ENST00000562791 PCM1Q15154 2024 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 PFASO15067 1338 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 ZMYM6O95789 1325 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 ZNF609O15014 1411 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 ABCC5O15440 1437 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 TROQ12816 1431 aaPredicted RBP4.22□□□□□ -1.73
CHD9-206ENST00000562791 ANKARQ7Z5J8 1434 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 ARAP3Q8WWN8 1544 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 A0A1W2PPQ1 181 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 ASPDHA6ND91 283 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 TMEM202A6NGA9 273 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 A8MU76 341 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 PSMA7O14818 248 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 ADAMDEC1O15204 470 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 CALUO43852 315 aaPredicted RBP4.22□□□□□ -1.73
CHD9-206ENST00000562791 DPM1O60762 260 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 ZNF780AO75290 641 aaPredicted RBP4.22□□□□□ -1.73
CHD9-206ENST00000562791 AVILO75366 819 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 SPAG7O75391 227 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 PRKRAO75569 313 aaKnown RBP4.22□□□□□ -1.73
CHD9-206ENST00000562791 SLC22A5O76082 557 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 LGI1O95970 557 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 PTTG1O95997 202 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 MT-CYBP00156 380 aaPredicted RBP4.22□□□□□ -1.73
CHD9-206ENST00000562791 AGTP01019 485 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 AMBPP02760 352 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 SHBGP04278 402 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 HCKP08631 526 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 HNRNPA1P09651 372 aaKnown RBP eCLIP4.22□□□□□ -1.73
CHD9-206ENST00000562791 FAM58BPP0C7Q3 252 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 DPEP1P16444 411 aa4.22□□□□□ -1.73
CHD9-206ENST00000562791 XRCC1P18887 633 aaPredicted RBP4.22□□□□□ -1.73
CHD9-206ENST00000562791 HNF1AP20823 631 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms