RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SOX17Q9H6I2 414 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF696Q9H7X3 374 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ANKHQ9HCJ1 492 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PDE7BQ9NP56 450 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 GIMAP4Q9NUV9 329 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 DCAF16Q9NXF7 216 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 GIN1Q9NXP7 522 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 SMPD3Q9NY59 655 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 NKIRAS2Q9NYR9 191 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 MAT2BQ9NZL9 334 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PTGFRNQ9P2B2 879 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 SUSD2Q9UGT4 822 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 KCND3Q9UK17 655 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 C19orf53Q9UNZ5 99 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CHST2Q9Y4C5 530 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 LYVE1Q9Y5Y7 322 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ENPP4Q9Y6X5 453 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 UNC13CQ8NB66 2214 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 FER1L5A0AVI2 2057 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CCDC88CQ9P219 2028 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 A0A0G2JPF8 293 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 MYOCOSA0A1B0GUC4 107 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 A0A1W2PQM1 296 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 HNRNPCL2B2RXH8 293 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 PATE3B3GLJ2 98 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 HNRNPCL3B7ZW38 293 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 C9orf172C9J069 976 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 H0YIG0 161 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 FFAR1O14842 300 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SIGLEC6O43699 453 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 DUX1O43812 170 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SLC28A2O43868 658 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 CTNSO60931 367 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 LDB3O75112 727 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SMNDC1O75940 238 aaKnown RBP eCLIP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 DNAJB5O75953 348 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SLITRK5O94991 958 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 CBX7O95931 251 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 IFNA14P01570 189 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 FESP07332 822 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SLC35E2P0CK97 266 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 HNRNPCL4P0DMR1 293 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 THRBP10828 461 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ACP2P11117 423 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 RNH1P13489 461 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ETS2P15036 469 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 FOLR1P15328 257 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 NELFEP18615 380 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ALDH4A1P30038 563 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 PIGAP37287 484 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 MPLP40238 635 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 NBL1P41271 181 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 OR1E2P47887 323 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ARRB1P49407 418 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 DAPP51397 102 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 EFNA3P52797 238 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 HSD11B2P80365 405 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 PRR5P85299 388 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 MAT1AQ00266 395 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 MAP4K2Q12851 820 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 APOFQ13790 326 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 KCNAB1Q14722 419 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 CYP27C1Q4G0S4 372 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 TRMT12Q53H54 448 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 TCTE1Q5JU00 501 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 OTUD3Q5T2D3 398 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 KDM4DQ6B0I6 523 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 LAIR1Q6GTX8 287 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 LAIR2Q6ISS4 152 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 NIPAL1Q6NVV3 410 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 GUSBP11Q6P575 273 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 TMEM154Q6P9G4 183 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 BHLHB9Q6PI77 547 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ASCL5Q7RTU5 278 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ARHGAP22Q7Z5H3 698 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 TSPYL5Q86VY4 417 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 KMT5CQ86Y97 462 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 GATAD2AQ86YP4 633 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ZDHHC13Q8IUH4 622 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 PLXDC1Q8IUK5 500 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 LACC1Q8IV20 430 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 DHRSXQ8N5I4 330 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 Q8N9G6 341 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SMYD1Q8NB12 490 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SLC16A11Q8NCK7 471 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 CHDHQ8NE62 594 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 OR6C4Q8NGE1 309 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 OR1L3Q8NH93 324 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 BBS10Q8TAM1 723 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 MAGEE2Q8TD90 523 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 FBLIM1Q8WUP2 373 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 XAGE5Q8WWM1 108 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 IPCEF1Q8WWN9 437 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 GEMIN6Q8WXD5 167 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 OTUB1Q96FW1 271 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 FBXL20Q96IG2 436 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 MAGED4Q96JG8 741 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 CNBD2Q96M20 576 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 MS4A4EQ96PG1 132 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 TRNT1Q96Q11 434 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms