RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CCDC169A6NNP5 214 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 K7EQS6 105 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 OGTO15294 1046 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 YKT6O15498 198 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 PFKFB2O60825 505 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ATP6V1G1O75348 118 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 SAP30O75446 220 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 PRAMEF12O95522 483 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 OLFM2O95897 454 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 IGLV3-19P01714 112 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 IGHEP01854 428 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 APODP05090 189 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 HMGA1P17096 107 aaKnown RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 MT3P25713 68 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 GIFP27352 417 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 SRD5A2P31213 254 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 STIP1P31948 543 aaKnown RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 PRPHP41219 470 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 LEPRP48357 1165 aaKnown RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 DHPSP49366 369 aaPredicted RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 XGP55808 180 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 KCNK10P57789 538 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 OR1D5P58170 312 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 GNB1P62873 340 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ZNF33AQ06730 810 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ILKQ13418 452 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 CEACAM7Q14002 265 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ZNF77Q15935 545 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 SGCBQ16585 318 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 KRTAP27-1Q3LI81 207 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 TMEM30BQ3MIR4 351 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ZFP69Q49AA0 526 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 LRRC37A5PQ49AS3 106 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ZNF776Q68DI1 518 aaPredicted RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 TRIM65Q6PJ69 517 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 C1orf186Q6ZWK4 172 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 TMEM150AQ86TG1 271 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 CDR2LQ86X02 465 aaPredicted RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 NAXDQ8IW45 347 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 PEX5LQ8IYB4 626 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 CHCHD4Q8N4Q1 142 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 LRRC52Q8N7C0 313 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 NAT8LQ8N9F0 302 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 TMEM161BQ8NDZ6 487 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 AZIN2Q96A70 460 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 SENP8Q96LD8 212 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 LURAP1Q96LR2 239 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ZNF560Q96MR9 790 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 NEDD4LQ96PU5 975 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ATP6V0BQ99437 205 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 NAP1L3Q99457 506 aaPredicted RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 HOXD1Q9GZZ0 328 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 TSPYL1Q9H0U9 437 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 THAP9Q9H5L6 903 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 MED20Q9H944 212 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 MARCH7Q9H992 704 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 MAGEF1Q9HAY2 307 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 UBE2TQ9NPD8 197 aaPredicted RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 GCNT4Q9P109 453 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 KLK13Q9UKR3 277 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 POMT2Q9UKY4 750 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 ODF2LQ9ULJ1 636 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 PLCL2Q9UPR0 1127 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 GAB2Q9UQC2 676 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 STYXL1Q9Y6J8 313 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 PTPRZ1P23471 2315 aaPredicted RBP3.21□□□□□ -1.9
HERC1-215ENST00000561436 MICAL3Q7RTP6 2002 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 DCHS1Q96JQ0 3298 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 TET1Q8NFU7 2136 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 CFAP54Q96N23 3096 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 A0A0A6YYC8 382 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 SPAARA0A1B0GVQ0 90 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 TMEM129A0AVI4 362 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 SYCE3A1L190 88 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 KPNA7A9QM74 516 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ZNF732B4DXR9 585 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 I3L1I5 382 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 I3L4J1 428 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 J3QKU1 62 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 CYB561D2O14569 222 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 CHUKO15111 745 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 MTRF1O75570 445 aaKnown RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 CEACAM4O75871 244 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 AMBPP02760 352 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 TRIM49P0CI25 452 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 TRIM49CP0CI26 452 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 HLA-EP13747 358 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ANPEPP15144 967 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ZNF18P17022 549 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ATF6P18850 670 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 C4BPBP20851 252 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 MMP12P39900 470 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 OPRD1P41143 372 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 SOX3P41225 446 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 SLC6A12P48065 614 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 TAF6P49848 677 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 PEX3P56589 373 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 NOP14P78316 857 aaKnown RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 CNTN1Q12860 1018 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms