RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 IL32P24001 234 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 APEX1P27695 318 aaKnown RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 ECI1P42126 302 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 FABP6P51161 128 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 LIM2P55344 173 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 NRG3P56975 720 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 EEFSECP57772 596 aaKnown RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 HERVK_113P63132 956 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ERVK-8P63133 956 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ACVR1Q04771 509 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 CDH17Q12864 832 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ZNF267Q14586 743 aaPredicted RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 TSC22D1Q15714 1073 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 TAB1Q15750 504 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 BCL2A1Q16548 175 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 FXNQ16595 210 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PPP1R21Q6ZMI0 780 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 DEF8Q6ZN54 512 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 BBS12Q6ZW61 710 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 SDCCAG8Q86SQ7 713 aaPredicted RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 KLHDC8BQ8IXV7 354 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 KLHDC8AQ8IYD2 350 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PRR22Q8IZ63 422 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 CNPY4Q8N129 248 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 MUC15Q8N387 334 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 SYT8Q8NBV8 401 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ZNF540Q8NDQ6 660 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 OR6K3Q8NGY3 331 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 SLC35G2Q8TBE7 412 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ACTL9Q8TC94 416 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 LPGAT1Q92604 370 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PPWD1Q96BP3 646 aaKnown RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 TSPAN17Q96FV3 270 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 RBM18Q96H35 190 aaKnown RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 FBXL20Q96IG2 436 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 C20orf173Q96LM9 149 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 TSNARE1Q96NA8 513 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 DHRS9Q9BPW9 319 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 AIF1LQ9BQI0 150 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 OSBPL11Q9BXB4 747 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ERVK-6Q9BXR3 956 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 HDHD5Q9BXW7 423 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PACSIN1Q9BY11 444 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 PRRG4Q9BZD6 226 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 AICDAQ9GZX7 198 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 COPS7BQ9H9Q2 264 aaPredicted RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 FOLH1BQ9HBA9 442 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 GALNT9Q9HCQ5 603 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 SNX15Q9NRS6 342 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 KLRF1Q9NZS2 232 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 DKKL1Q9UK85 242 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 CLEC4AQ9UMR7 237 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 DAPP1Q9UN19 280 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 USP22Q9UPT9 525 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 EXO1Q9UQ84 846 aaKnown RBP4.7□□□□□ -1.66
HERC1-213ENST00000561359 ERVK-19Q9WJR5 959 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 ZNF175Q9Y473 711 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 TCAF1Q9Y4C2 921 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 FKBP7Q9Y680 259 aa4.7□□□□□ -1.66
HERC1-213ENST00000561359 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.7□□□□□ -1.66
HERC1-213ENST00000561359 C2orf92A0A1B0GVN3 265 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 LOC390937A0A1W2PQ73 354 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 CCT8L1PA6NM43 557 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 B2RBV5 119 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 C22orf46C9J442 243 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 H0YC42 278 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 ICOSLGO75144 302 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 AQP8O94778 261 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 MPC1LP0DKB6 136 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 HKR1P10072 659 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 FCGR2AP12318 317 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 PEPDP12955 493 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 ENO3P13929 434 aaPredicted RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 TPSB2P20231 275 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 COMTP21964 271 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 CERS1P27544 350 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 SRD5A2P31213 254 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 HNRNPH1P31943 449 aaKnown RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 SLC1A1P43005 524 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 STT3AP46977 705 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 KCNC1P48547 511 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 ARFIP2P53365 341 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 TPD52P55327 224 aaPredicted RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 SLC37A1P57057 533 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 RPS13P62277 151 aaKnown RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 REEP5Q00765 189 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 PLIN5Q00G26 463 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 CHRNB3Q05901 458 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 KIF5AQ12840 1032 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 CTBP1Q13363 440 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 EBPQ15125 230 aaKnown RBP4.69□□□□□ -1.66
HERC1-213ENST00000561359 GUSBP1Q15486 140 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 TPSAB1Q15661 275 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 SGCBQ16585 318 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 MRNIPQ6NTE8 343 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 SLC30A6Q6NXT4 461 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 CASC4Q6P4E1 433 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 ZNF793Q6ZN11 406 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 DGAT2L6Q6ZPD8 337 aa4.69□□□□□ -1.66
HERC1-213ENST00000561359 APTXQ7Z2E3 356 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms