RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SPDL1Q96EA4 605 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 NEURL3Q96EH8 262 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 C16orf58Q96GQ5 468 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 ITCHQ96J02 903 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 MAGED4Q96JG8 741 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 FRMD6Q96NE9 622 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 COL21A1Q96P44 957 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 PANX1Q96RD7 426 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 TAAR6Q96RI8 345 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 FAM173AQ9BQD7 235 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 ANGPTL4Q9BY76 406 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 HES7Q9BYE0 225 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 NSRP1Q9H0G5 558 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 EPN3Q9H201 632 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 PROK2Q9HC23 129 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 SAR1AQ9NR31 198 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 DEPPQ9NTK1 212 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 MRTO4Q9UKD2 239 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 CBLCQ9ULV8 474 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 VPS4AQ9UN37 437 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 FAF1Q9UNN5 650 aaPredicted RBP8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 NTNG1Q9Y2I2 539 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 PCDHGB3Q9Y5G1 929 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 MAST4O15021 2626 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 POLEQ07864 2286 aa8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 RP1L1Q8IWN7 2480 aaPredicted RBP8.85□□□□□ -0.99
RABGGTA-221ENST00000561055 RNF103-CHMP3A0A140T963 221 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 RFXANKO14593 260 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 ASNA1O43681 348 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 PEX1O43933 1283 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SNX3O60493 162 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SHOX2O60902 331 aaPredicted RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 REM1O75628 298 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SNX4O95219 450 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 IL33O95760 270 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CRYABP02511 175 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 P04436 131 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 NGFRP08138 427 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 ALOX5P09917 674 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CCL3P10147 92 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CAPN3P20807 821 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 GABRA3P34903 492 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CASP3P42574 277 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CDKN2CP42773 168 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 FBXW4P57775 412 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 MRPS22P82650 360 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 FOXO1Q12778 655 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 TP53BP2Q13625 1128 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 LASP1Q14847 261 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 NNATQ16517 81 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 DECR1Q16698 335 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SPDYE7PQ495Y7 208 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 TIGD2Q4W5G0 525 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SLC30A6Q6NXT4 461 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 BNC2Q6ZN30 1099 aaPredicted RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SPATA21Q7Z572 469 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CPLX4Q7Z7G2 160 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 PRR22Q8IZ63 422 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CISD2Q8N5K1 135 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 DPP10Q8N608 796 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 BCORP1Q8N888 145 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 FAM13CQ8NE31 585 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CHDHQ8NE62 594 aaPredicted RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 OR2M7Q8NG81 312 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 OR10G3Q8NGC4 313 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 OR4N2Q8NGD1 307 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 CPT1CQ8TCG5 803 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 ADAMTS15Q8TE58 950 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 GRHL3Q8TE85 626 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 ZFP90Q8TF47 636 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 FAR1Q8WVX9 515 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 PHF3Q92576 2039 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 VPS33AQ96AX1 596 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SPENQ96T58 3664 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 ELAC2Q9BQ52 826 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SLC35A5Q9BS91 424 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 INPP5KQ9BT40 448 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 BTBD2Q9BX70 525 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 PAIP1Q9H074 479 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SERHL2Q9H4I8 314 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 EQTNQ9NQ60 294 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 KLHL1Q9NR64 748 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 AGPAT4Q9NRZ5 378 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 SLC6A13Q9NSD5 602 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 OR10H1Q9Y4A9 318 aa8.84□□□□□ -0.99
RABGGTA-221ENST00000561055 A0A096LPI6 279 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 TRBV5-3A0A0A0MS03 114 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 GXYLT2A0PJZ3 443 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 ADAM10O14672 748 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 FADS1O60427 444 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 CCDC22O60826 627 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 TRIM3O75382 744 aaPredicted RBP8.83□□□□□ -1
RABGGTA-221ENST00000561055 GLSO94925 669 aaPredicted RBP8.83□□□□□ -1
RABGGTA-221ENST00000561055 KCNK2O95069 426 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 KCNH1O95259 989 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 KRT75O95678 551 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 AGR2O95994 175 aa8.83□□□□□ -1
RABGGTA-221ENST00000561055 AK1P00568 194 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms