RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 STARP49675 285 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 DGKQP52824 942 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 PNLIPRP2P54317 469 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 ZNF763Q0D2J5 394 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 FOXF2Q12947 444 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 OR5M10Q6IEU7 315 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 AAGABQ6PD74 315 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 CDC20BQ86Y33 519 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 SLC44A2Q8IWA5 706 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNX1-213ENST00000561026 RMND5BQ96G75 393 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 BBS4Q96RK4 519 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 TM9SF2Q99805 663 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 TAS2R7Q9NYW3 318 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 NF1P21359 2839 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 ABCA4P78363 2273 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 A0A1W2PPM1 405 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 MYO1GB0I1T2 1018 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 ZIC3O60481 467 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 RCBTB2O95199 551 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 MYL2P10916 166 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 GRK2P25098 689 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 LHX2P50458 406 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 GAS1P54826 345 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 SORDQ00796 357 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 PSG6Q00889 435 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 C2orf80Q0P641 193 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 PRSS53Q2L4Q9 553 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 ZYG11AQ6WRX3 759 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 SH2D5Q6ZV89 423 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 TRIM46Q7Z4K8 759 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 OR4N2Q8NGD1 307 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 GOT1L1Q8NHS2 421 aaPredicted RBP14.72□□□□□ -0.05
SNX1-213ENST00000561026 WNT2BQ93097 391 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 EFHD2Q96C19 240 aaPredicted RBP14.72□□□□□ -0.05
SNX1-213ENST00000561026 DTNBP1Q96EV8 351 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 DOCK7Q96N67 2140 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 ZFP3Q96NJ6 502 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 RHOXF2Q9BQY4 288 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 G6PC3Q9BUM1 346 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 SFXN3Q9BWM7 321 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 EDARQ9UNE0 448 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 OR10H1Q9Y4A9 318 aa14.72□□□□□ -0.05
SNX1-213ENST00000561026 A0A087WV62 115 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 CLCA1A8K7I4 914 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 B4DXG7 233 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 H3BQF6 201 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 SLITRK5O94991 958 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 CHMP24386 653 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 NCBP2P52298 156 aaKnown RBP eCLIP14.71□□□□□ -0.06
SNX1-213ENST00000561026 NAA20P61599 178 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 MRPS22P82650 360 aaKnown RBP14.71□□□□□ -0.06
SNX1-213ENST00000561026 FAM71E1Q6IPT2 247 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 FRMD7Q6ZUT3 714 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 LINC01560Q8TB33 94 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 SFXN2Q96NB2 322 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 MIEF1Q9NQG6 463 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 GRID1Q9ULK0 1009 aa14.71□□□□□ -0.06
SNX1-213ENST00000561026 WBP11Q9Y2W2 641 aaKnown RBP14.71□□□□□ -0.06
SNX1-213ENST00000561026 PLOD2O00469 737 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 COQ9O75208 318 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 GLRA3O75311 464 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 PROCP04070 461 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 JUNP05412 331 aaKnown RBP14.7□□□□□ -0.06
SNX1-213ENST00000561026 ZNF708P17019 499 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 DPP4P27487 766 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 EVI2BP34910 448 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 MC3RP41968 323 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 CLDN18P56856 261 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 IMPG1Q17R60 797 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 CYP27C1Q4G0S4 372 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 PLXDC2Q6UX71 529 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 CDC26Q8NHZ8 85 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 FAM76AQ8TAV0 307 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 INTS12Q96CB8 462 aaKnown RBP14.7□□□□□ -0.06
SNX1-213ENST00000561026 ACBD3Q9H3P7 528 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 MYNNQ9NPC7 610 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 CLCF1Q9UBD9 225 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 DKKL1Q9UK85 242 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 C19orf53Q9UNZ5 99 aaPredicted RBP14.7□□□□□ -0.06
SNX1-213ENST00000561026 PLEKHA6Q9Y2H5 1048 aa14.7□□□□□ -0.06
SNX1-213ENST00000561026 RPH3AQ9Y2J0 694 aaPredicted RBP14.7□□□□□ -0.06
SNX1-213ENST00000561026 UPK1AO00322 258 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 RSL1D1O76021 490 aaKnown RBP14.69□□□□□ -0.06
SNX1-213ENST00000561026 PSMG1O95456 288 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 DNASE1P24855 282 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 CCT5P48643 541 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 DSCR4P56555 118 aaPredicted RBP14.69□□□□□ -0.06
SNX1-213ENST00000561026 B3GALT5-AS1P59052 145 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 DNAJB13P59910 316 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 ZNF155Q12901 538 aaPredicted RBP14.69□□□□□ -0.06
SNX1-213ENST00000561026 GAB1Q13480 694 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 BCL2A1Q16548 175 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 TMEM107Q6UX40 140 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 OR2L13Q8N349 312 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 CHDHQ8NE62 594 aaPredicted RBP14.69□□□□□ -0.06
SNX1-213ENST00000561026 OR4K17Q8NGC6 315 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 AMDHD1Q96NU7 426 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 TMUB1Q9BVT8 246 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 RBM24Q9BX46 236 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms