RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 OR4K17Q8NGC6 315 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 FNDC9Q8TBE3 224 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 SAYSD1Q9NPB0 183 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 HEATR5AQ86XA9 2040 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 A0A087X1B8 175 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 TCRBV9S1A1TA0A576 114 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 B4DXG7 233 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 ERAL1O75616 437 aaKnown RBP16.66■□□□□ 0.26
TPM1-226ENST00000560959 PLAUP00749 431 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 GSTA2P09210 222 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 CT45A8P0DMV1 189 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 CT45A9P0DMV2 189 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 FCGR2AP12318 317 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 KRT20P35900 424 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 MAPK12P53778 367 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 RPS3AP61247 264 aaKnown RBP16.66■□□□□ 0.26
TPM1-226ENST00000560959 SLMAPQ14BN4 828 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 PON3Q15166 354 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 GLYR1Q49A26 553 aaPredicted RBP16.66■□□□□ 0.26
TPM1-226ENST00000560959 CT45A2Q5DJT8 189 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 FRG2Q64ET8 278 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 STAC2Q6ZMT1 411 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 SLC35F6Q8N357 371 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 METTL25Q8N6Q8 603 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 ZNF675Q8TD23 568 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 NXNL1Q96CM4 212 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 PLPPR2Q96GM1 343 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 ZNF681Q96N22 645 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 FRG2BQ96QU4 278 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 WHRNQ9P202 907 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 LAMP3Q9UQV4 416 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 ZNF337Q9Y3M9 751 aa16.66■□□□□ 0.26
TPM1-226ENST00000560959 ABCA1O95477 2261 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 EIF3HO15372 352 aaKnown RBP eCLIP16.65■□□□□ 0.26
TPM1-226ENST00000560959 GFAPP14136 432 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 TCP1P17987 556 aaKnown RBP16.65■□□□□ 0.26
TPM1-226ENST00000560959 ACAP2Q15057 778 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 FAM83EQ2M2I3 478 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 CHRFAM7AQ494W8 412 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 C3orf62Q6ZUJ4 267 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 LARP4Q71RC2 724 aaKnown RBP eCLIP16.65■□□□□ 0.26
TPM1-226ENST00000560959 CMC1Q7Z7K0 106 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 KLHL7Q8IXQ5 586 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 MAPK1IP1LQ8NDC0 245 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 OR6K3Q8NGY3 331 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 GFM2Q969S9 779 aaKnown RBP16.65■□□□□ 0.26
TPM1-226ENST00000560959 TM4SF18Q96CE8 201 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 NTMT1Q9BV86 223 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 MRPL1Q9BYD6 325 aaKnown RBP16.65■□□□□ 0.26
TPM1-226ENST00000560959 STMN4Q9H169 189 aaPredicted RBP16.65■□□□□ 0.26
TPM1-226ENST00000560959 SDHAF3Q9NRP4 125 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 EMC9Q9Y3B6 208 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 ZNF780BQ9Y6R6 833 aa16.65■□□□□ 0.26
TPM1-226ENST00000560959 H0YC42 278 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 THBS1P07996 1170 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 PCSK2P16519 638 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 HK1P19367 917 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 IL12BP29460 328 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 TPD52P55327 224 aaPredicted RBP16.64■□□□□ 0.25
TPM1-226ENST00000560959 TRA2BP62995 288 aaKnown RBP16.64■□□□□ 0.25
TPM1-226ENST00000560959 RAET1LQ5VY80 246 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 BEND4Q6ZU67 534 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 OR2M3Q8NG83 312 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 AKAP1Q92667 903 aaKnown RBP eCLIP16.64■□□□□ 0.25
TPM1-226ENST00000560959 GMPPAQ96IJ6 420 aaPredicted RBP16.64■□□□□ 0.25
TPM1-226ENST00000560959 VSTM2LQ96N03 204 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 DSN1Q9H410 356 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 YAE1D1Q9NRH1 226 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 PPP4R1LQ9P1A2 415 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 GPR52Q9Y2T5 361 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 AP4B1Q9Y6B7 739 aa16.64■□□□□ 0.25
TPM1-226ENST00000560959 OR7A17O14581 309 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 DUSP2Q05923 314 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 EXOC3L2Q2M3D2 409 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 ZNF628Q5EBL2 1059 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 DNAJC14Q6Y2X3 702 aaPredicted RBP16.63■□□□□ 0.25
TPM1-226ENST00000560959 DNM1P46Q6ZS02 220 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 COMMD6Q7Z4G1 85 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 CTAGE3PQ8IX95 158 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 CENPLQ8N0S6 344 aaPredicted RBP16.63■□□□□ 0.25
TPM1-226ENST00000560959 ATP6V1E2Q96A05 226 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 KLHL29Q96CT2 875 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 CNRIP1Q96F85 164 aaPredicted RBP16.63■□□□□ 0.25
TPM1-226ENST00000560959 FAIM2Q9BWQ8 316 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 TRIM31Q9BZY9 425 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 PTGES2Q9H7Z7 377 aa16.63■□□□□ 0.25
TPM1-226ENST00000560959 NOL11Q9H8H0 719 aaKnown RBP16.63■□□□□ 0.25
TPM1-226ENST00000560959 OR2M5A3KFT3 312 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 A8MV72 311 aaPredicted RBP16.62■□□□□ 0.25
TPM1-226ENST00000560959 AQP8O94778 261 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 DANCRP0C864 163 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 FAM157CP0CG43 387 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 PSMB1P20618 241 aaKnown RBP16.62■□□□□ 0.25
TPM1-226ENST00000560959 TCEA1P23193 301 aaKnown RBP16.62■□□□□ 0.25
TPM1-226ENST00000560959 EVI2BP34910 448 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 MRPS35P82673 323 aaKnown RBP16.62■□□□□ 0.25
TPM1-226ENST00000560959 IFT88Q13099 833 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 LTB4RQ15722 352 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 SAMD14Q8IZD0 417 aaPredicted RBP16.62■□□□□ 0.25
TPM1-226ENST00000560959 KCTD4Q8WVF5 259 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms