RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GPR55Q9Y2T6 319 aaPredicted RBP9.66□□□□□ -0.86
TPM1-221ENST00000559831 MED13Q9UHV7 2174 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 FRG2CA6NGY1 282 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 ARGFXA6NJG6 315 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 ZNF891A8MT65 544 aaPredicted RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 A8MUI8 341 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 WWP2O00308 870 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 SOX30O94993 753 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 KCNK2O95069 426 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 AK1P00568 194 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 ICAM2P13598 275 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 ATP6V1B2P21281 511 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 DRD5P21918 477 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 CRISP3P54108 245 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 POLE2P56282 527 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 MRPS22P82650 360 aaKnown RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 PLCXD2Q0VAA5 305 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 Q0VFX4 171 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 TRAP1Q12931 704 aaKnown RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 GNA13Q14344 377 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 MAPK11Q15759 364 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 ARHGAP11BQ3KRB8 267 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 INTS11Q5TA45 600 aaKnown RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 FCRLBQ6BAA4 426 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 HEPHL1Q6MZM0 1159 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 REEP3Q6NUK4 255 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 C16orf47Q6ZP98 133 aaPredicted RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 HMGN2P46Q86SG4 172 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 SPATA24Q86W54 205 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 PROSER1Q86XN7 944 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 PTRH1Q86Y79 214 aaKnown RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 SPPL2CQ8IUH8 684 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 SLC30A8Q8IWU4 369 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 KBTBD2Q8IY47 623 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 BCORP1Q8N888 145 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 BHLHE22Q8NFJ8 381 aaPredicted RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 OR5L2Q8NGL0 311 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 BBS10Q8TAM1 723 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 NUBPLQ8TB37 319 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 WDR60Q8WVS4 1066 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 NSMCE2Q96MF7 247 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 DCBLD2Q96PD2 775 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 TRNT1Q96Q11 434 aaKnown RBP9.65□□□□□ -0.86
TPM1-221ENST00000559831 LMF1Q96S06 567 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 TRIM15Q9C019 465 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 RUBCNLQ9H714 662 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 FBXO34Q9NWN3 711 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 CALML5Q9NZT1 146 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 ACTR3BQ9P1U1 418 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 ANGPTL2Q9UKU9 493 aa9.65□□□□□ -0.86
TPM1-221ENST00000559831 NPIPA5A0A0B4J1W7 369 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 NPIPA7E9PJI5 369 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 H0YHG0 523 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 ACOT8O14734 319 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 REM1O75628 298 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 SERPINA1P01009 418 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 IGKV1D-16P01601 117 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 OPN1SWP03999 348 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 SERPINA7P05543 415 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 NPIPA8P0DM63 369 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 ATP6V1C1P21283 382 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 ITGA3P26006 1051 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 IL12BP29460 328 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 KRT20P35900 424 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 NRG3P56975 720 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CHRNEQ04844 493 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CDC20Q12834 499 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 VEZF1Q14119 521 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 KPNB1Q14974 876 aaKnown RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 GPR68Q15743 365 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 DECR1Q16698 335 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CYP27C1Q4G0S4 372 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 DCAF10Q5QP82 559 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 LCN8Q6JVE9 175 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 TCTN3Q6NUS6 607 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 LRRC74BQ6ZQY2 392 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 TAGAPQ8N103 731 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 SLC34A3Q8N130 599 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 METTL25Q8N6Q8 603 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 SIRT6Q8N6T7 355 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 ZNF441Q8N8Z8 693 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 ZSCAN1Q8NBB4 408 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CHDHQ8NE62 594 aaPredicted RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 OR8K3Q8NH51 312 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 BRIX1Q8TDN6 353 aaKnown RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 SLC26A7Q8TE54 656 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 TMBIM1Q969X1 311 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 EFHD2Q96C19 240 aaPredicted RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 HSPBAP1Q96EW2 488 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 THOC3Q96J01 351 aaKnown RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 FER1L6-AS2Q96M78 137 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CCNL2Q96S94 520 aaPredicted RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 SDF2Q99470 211 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 TREX2Q9BQ50 279 aaPredicted RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 DPH1Q9BZG8 443 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CDCP1Q9H5V8 836 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CACYBPQ9HB71 228 aaKnown RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 MRTO4Q9UKD2 239 aaKnown RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 MKLN1Q9UL63 735 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms