RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 PPP3R2Q96LZ3 170 aa16.05■□□□□ 0.16
SMAD3-210ENST00000559092 UCK2Q9BZX2 261 aa16.05■□□□□ 0.16
SMAD3-210ENST00000559092 SSU72Q9NP77 194 aaKnown RBP16.05■□□□□ 0.16
SMAD3-210ENST00000559092 ACSS1Q9NUB1 689 aaPredicted RBP16.05■□□□□ 0.16
SMAD3-210ENST00000559092 Q9UFV3 132 aa16.05■□□□□ 0.16
SMAD3-210ENST00000559092 MRTO4Q9UKD2 239 aaKnown RBP16.05■□□□□ 0.16
SMAD3-210ENST00000559092 MRPS18CQ9Y3D5 142 aaKnown RBP16.05■□□□□ 0.16
SMAD3-210ENST00000559092 WIF1Q9Y5W5 379 aa16.05■□□□□ 0.16
SMAD3-210ENST00000559092 CREBBPQ92793 2442 aa16.05■□□□□ 0.16
SMAD3-210ENST00000559092 CACNA1DQ01668 2161 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 C2orf72A6NCS6 295 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 HSPB2A8KAH6 182 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 TMEM114B3SHH9 223 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 PIP5K1BO14986 540 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 PDPK1O15530 556 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 CTIFO43310 598 aaKnown RBP16.04■□□□□ 0.16
SMAD3-210ENST00000559092 NME6O75414 186 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-210ENST00000559092 BCKDHAP12694 445 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 CREB1P16220 341 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 IGFBP2P18065 325 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 BMP7P18075 431 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 MAPK1P28482 360 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 TIMP3P35625 211 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 ADH7P40394 386 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 FRKP42685 505 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-210ENST00000559092 RPL38P63173 70 aaKnown RBP16.04■□□□□ 0.16
SMAD3-210ENST00000559092 ZNF844Q08AG5 666 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 HSPB2Q16082 182 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 DECR1Q16698 335 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 SLC25A35Q3KQZ1 300 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 KRT71Q3SY84 523 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 WIPI1Q5MNZ9 446 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-210ENST00000559092 OR4N2Q8NGD1 307 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 CEP70Q8NHQ1 597 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 ZFP28Q8NHY6 868 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 GFM2Q969S9 779 aaKnown RBP16.04■□□□□ 0.16
SMAD3-210ENST00000559092 C14orf79Q96F83 325 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 TSSK3Q96PN8 268 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 LMF2Q9BU23 707 aaKnown RBP16.04■□□□□ 0.16
SMAD3-210ENST00000559092 OR2B2Q9GZK3 357 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 C3orf14Q9HBI5 128 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 SLC24A3Q9HC58 644 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 Q9N2J8 555 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 SERHLQ9NQF3 203 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 NTMQ9P121 344 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 CBLCQ9ULV8 474 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 SLC6A5Q9Y345 797 aa16.04■□□□□ 0.16
SMAD3-210ENST00000559092 DNAJC13O75165 2243 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 FAM90A27PA6NNH2 459 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 ESPNB1AK53 854 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 TMEM233B4DJY2 109 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 PRPS2P11908 318 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 CPN1P15169 458 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 MSX1P28360 303 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 RPL3P39023 403 aaKnown RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 GAS1P54826 345 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 PSMD4P55036 377 aaKnown RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 MANFP55145 182 aaKnown RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 GAB1Q13480 694 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 GALNTL6Q49A17 601 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 VPS26BQ4G0F5 336 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 ACSF3Q4G176 576 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 XKR7Q5GH72 579 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 MEX3BQ6ZN04 569 aaKnown RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 ZCCHC23Q6ZST2 131 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 ZNF551Q7Z340 670 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 CROCCP2Q86T23 111 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 YRDCQ86U90 279 aaKnown RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 LACC1Q8IV20 430 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 NUDCD3Q8IVD9 361 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 HOXB13Q92826 284 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 WDYHV1Q96HA8 205 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 UGT2B28Q9BY64 529 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 CALHM2Q9HA72 323 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 NPDC1Q9NQX5 325 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-210ENST00000559092 SH3BP4Q9P0V3 963 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 BAIAP2L1Q9UHR4 511 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 ZDHHC2Q9UIJ5 367 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 ABCG2Q9UNQ0 655 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 MAPRE3Q9UPY8 281 aa16.03■□□□□ 0.16
SMAD3-210ENST00000559092 FBN2P35556 2912 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 NKX2-6A6NCS4 301 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 CD8B2A6NJW9 211 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 BIRC5O15392 142 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 AKAP10O43572 662 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 SNUPNO95149 360 aaKnown RBP16.02■□□□□ 0.16
SMAD3-210ENST00000559092 IL33O95760 270 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 SRD5A2P31213 254 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 CEACAM8P31997 349 aaPredicted RBP16.02■□□□□ 0.16
SMAD3-210ENST00000559092 SERPINB4P48594 390 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 HSPB3Q12988 150 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 MLC1Q15049 377 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 ATP6AP1LQ52LC2 224 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 NSUN5P2Q63ZY6 315 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 SEM1Q6ZVN7 128 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 NATD1Q8N6N6 113 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 OR14L1PQ8NHC6 308 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 ZPLD1Q8TCW7 415 aa16.02■□□□□ 0.16
SMAD3-210ENST00000559092 CIDECQ96AQ7 238 aaPredicted RBP16.02■□□□□ 0.16
SMAD3-210ENST00000559092 EFHD2Q96C19 240 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms