RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TUBA8Q9NY65 449 aaPredicted RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 SLC25A37Q9NYZ2 338 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 SLAMF8Q9P0V8 285 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 MAPRE3Q9UPY8 281 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 SNX8Q9Y5X2 465 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 NBASA2RRP1 2371 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 PRRC2CQ9Y520 2896 aaKnown RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 FREM3P0C091 2139 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 TRBV5-3A0A0A0MS03 114 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 RNF103-CHMP3A0A140T963 221 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 OR6C70A6NIJ9 312 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 EIF4E1BA6NMX2 242 aaKnown RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 ICOSLGO75144 302 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 RASAL1O95294 804 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CPSF4O95639 269 aaKnown RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 IL6P05231 212 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CELA3AP09093 270 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 RFPL3SP0C7P2 107 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 NAGAP17050 411 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CNR1P21554 472 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 GABRA3P34903 492 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CASP3P42574 277 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 MRPS22P82650 360 aaKnown RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 TP53BP2Q13625 1128 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 UBAP2LQ14157 1087 aaKnown RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 MAPK11Q15759 364 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 PAGE3Q5JUK9 113 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 COX20Q5RI15 118 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CCNJQ5T5M9 372 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 ANXA8L1Q5VT79 327 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 TMEM81Q6P7N7 255 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 DNAJC14Q6Y2X3 702 aaPredicted RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 RETREG3Q86VR2 466 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CDRT4Q8N9R6 151 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 TMEM178AQ8NBL3 297 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 FAM13CQ8NE31 585 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 MIPOL1Q8TD10 442 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 FAR1Q8WVX9 515 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 NR4A3Q92570 626 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CHMP6Q96FZ7 201 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 RMND5BQ96G75 393 aaPredicted RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 PHF12Q96QT6 1004 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 OR7D2Q96RA2 312 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 ADOQ96SZ5 270 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 KLHDC3Q9BQ90 382 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 ANGPTL4Q9BY76 406 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 PAIP1Q9H074 479 aaKnown RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 GALNT9Q9HCQ5 603 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 TIMMDC1Q9NPL8 285 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 KLHL14Q9P2G3 628 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 CBLCQ9ULV8 474 aa10.48□□□□□ -0.73
SNX1-204ENST00000559061 KLF13Q9Y2Y9 288 aaPredicted RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 UBR5O95071 2799 aaPredicted RBP10.48□□□□□ -0.73
SNX1-204ENST00000559061 CENPVL1A0A0U1RR11 272 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 ANKRD33BA6NCL7 494 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 C2orf72A6NCS6 295 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 CCDC154A6NI56 674 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 NR5A2O00482 541 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 CFLARO15519 480 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 FADS1O60427 444 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 KCNK2O95069 426 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 CBX6O95503 412 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 IL33O95760 270 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 DDX5P17844 614 aaKnown RBP10.47□□□□□ -0.73
SNX1-204ENST00000559061 UQCRC2P22695 453 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 SOAT1P35610 550 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 ARFIP2P53365 341 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 PRR5P85299 388 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.73
SNX1-204ENST00000559061 MRPL49Q13405 166 aaKnown RBP10.47□□□□□ -0.73
SNX1-204ENST00000559061 HYAL4Q2M3T9 481 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 VPS26BQ4G0F5 336 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 CYP27C1Q4G0S4 372 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 AGKQ53H12 422 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 CMPK2Q5EBM0 449 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 SLC22A10Q63ZE4 541 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 MSANTD1Q6ZTZ1 278 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 SZRD1Q7Z422 152 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 C6orf120Q7Z4R8 191 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 ZGRF1Q86YA3 2104 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 DND1Q8IYX4 353 aaKnown RBP10.47□□□□□ -0.73
SNX1-204ENST00000559061 HORMAD2Q8N7B1 307 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 OR56A1Q8NGH5 318 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 OR52N2Q8NGI0 321 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 ZFP90Q8TF47 636 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 SLC9A6Q92581 669 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 DIO2Q92813 273 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 NEURL3Q96EH8 262 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 AURKBQ96GD4 344 aaPredicted RBP10.47□□□□□ -0.73
SNX1-204ENST00000559061 COL21A1Q96P44 957 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 STACQ99469 402 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 SLC35A5Q9BS91 424 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 ACTRT3Q9BYD9 372 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 TTTY12Q9BZ98 90 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 NMUR2Q9GZQ4 415 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 UBQLN3Q9H347 655 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 PIGUQ9H490 435 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 IKZF5Q9H5V7 419 aa10.47□□□□□ -0.73
SNX1-204ENST00000559061 ZNF703Q9H7S9 590 aaPredicted RBP10.47□□□□□ -0.73
SNX1-204ENST00000559061 C3orf14Q9HBI5 128 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms