RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787		A8MT66	165 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	COPE	O14579	308 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	UGDH	O60701	494 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	SMIM24	O75264	130 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	GLRA3	O75311	464 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ERAL1	O75616	437 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	SEMA3D	O95025	777 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	PDYN	P01213	254 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	RBP1	P09455	135 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	CPM	P14384	443 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	RAC2	P15153	192 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	CHN1	P15882	459 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	POR	P16435	677 aa	Predicted RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	GDF1	P27539	372 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	CRHR1	P34998	444 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	CASP3	P42574	277 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ZFP36L2	P47974	494 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	CCT5	P48643	541 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	AGFG1	P52594	562 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ARFIP1	P53367	373 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	MAPK12	P53778	367 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	SLC18A1	P54219	525 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	SLC18A2	Q05940	514 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	MGAT2	Q10469	447 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	FUT7	Q11130	342 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	IFT88	Q13099	833 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TOMM20	Q15388	145 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	LTB4R	Q15722	352 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	NTRK2	Q16620	822 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TSNAXIP1	Q2TAA8	658 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	CCDC153	Q494R4	210 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	EIPR1	Q53HC9	387 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TTMP	Q5BVD1	217 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	FNDC7	Q5VTL7	733 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	HLA-DQA1	Q5Y7H0	255 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TMEM198	Q66K66	360 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	COMMD6	Q7Z4G1	85 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	MTERF4	Q7Z6M4	381 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TMEM200A	Q86VY9	491 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ZZZ3	Q8IYH5	903 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TAGAP	Q8N103	731 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	METTL4	Q8N3J2	472 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	LIX1	Q8N485	282 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	NAXE	Q8NCW5	288 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TNIP2	Q8NFZ5	429 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	NEIL3	Q8TAT5	605 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	SPPL2A	Q8TCT8	520 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TRPC4AP	Q8TEL6	797 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ZNF483	Q8TF39	744 aa	Predicted RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ADIPOR1	Q96A54	375 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ARL8A	Q96BM9	186 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	TM4SF18	Q96CE8	201 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	APOPT1	Q96IL0	206 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	PELO	Q9BRX2	385 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	NTMT1	Q9BV86	223 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	IQCG	Q9H095	443 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	NXF5	Q9H1B4	397 aa	Known RBP	6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	OR10A5	Q9H207	317 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	LIME1	Q9H400	295 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ELOVL6	Q9H5J4	265 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ANKRA2	Q9H9E1	313 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ACKR4	Q9NPB9	350 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	C19orf73	Q9NVV2	129 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	PSD3	Q9NYI0	1048 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	EHD3	Q9NZN3	535 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	DCDC2	Q9UHG0	476 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	BCAP29	Q9UHQ4	241 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ZNF225	Q9UK10	706 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	CES1P1	Q9UKY3	287 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	L3MBTL1	Q9Y468	752 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	PCDHA9	Q9Y5H5	950 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	ACAN	P16112	2415 aa		6.39	□□□□□ -1.39
MARK3-215	ENST00000558787	PRRC2A	P48634	2157 aa	Known RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	MED13L	Q71F56	2210 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787		A0A1W2PPM1	405 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	FOXO6	A8MYZ6	492 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	STX16-NPEPL1	H3BU86	382 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	GOLGA8R	I6L899	631 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	STX16	O14662	325 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	TP53I11	O14683	189 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	TM9SF1	O15321	606 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	WDR1	O75083	606 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	OR4F21	O95013	312 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	ZWINT	O95229	277 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	TSPAN15	O95858	294 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	ABCB1	P08183	1280 aa	Predicted RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	RPS17	P08708	135 aa	Known RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	BMP5	P22003	454 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	GPX3	P22352	226 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	ABCD3	P28288	659 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	UQCRC1	P31930	480 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	GALNS	P34059	522 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	MASP1	P48740	699 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	ALDH9A1	P49189	494 aa		6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	CDK9	P50750	372 aa	Known RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	MRPS35	P82673	323 aa	Known RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	CRYZ	Q08257	329 aa	Known RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	GALNT1	Q10472	559 aa	Predicted RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	TBL3	Q12788	808 aa	Known RBP	6.38	□□□□□ -1.39
MARK3-215	ENST00000558787	RPS6KA2	Q15349	733 aa		6.38	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms