RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 AGXTP21549 392 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 CRHBPP24387 322 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 ELAVL4P26378 380 aaKnown RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 HLCSP50747 726 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 EMP3P54852 163 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 NPRL3Q12980 569 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 GNA13Q14344 377 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 EXOSC7Q15024 291 aaKnown RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 SEC23BQ15437 767 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 NDUFA9Q16795 377 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 ARHGAP11BQ3KRB8 267 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 TCTE1Q5JU00 501 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 TYW3Q6IPR3 259 aaKnown RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 TMEM71Q6P5X7 295 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 PIP4P1Q86T03 277 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 ADAMTS15Q8TE58 950 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 PEX11GQ96HA9 241 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 SLC41A2Q96JW4 573 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 PINK1Q9BXM7 581 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 MAN2C1Q9NTJ4 1040 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 TUBA8Q9NY65 449 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 KIF17Q9P2E2 1029 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 GPR55Q9Y2T6 319 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 ORC6Q9Y5N6 252 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 WDFY3Q8IZQ1 3526 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 CENPVL1A0A0U1RR11 272 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 OR2W5A6NFC9 320 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 DUXAA6NLW8 204 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 SYT5O00445 386 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 TPST2O60704 377 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 HTR1AP08908 422 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 NT5EP21589 574 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 ARL4DP49703 201 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 TRIP6Q15654 476 aaKnown RBP12.06□□□□□ -0.48
SMAD3-207ENST00000558763 COLEC12Q5KU26 742 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 C6orf141Q5SZD1 244 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 MLIPQ5VWP3 458 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 DEF8Q6ZN54 512 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 Q6ZPB1 254 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-207ENST00000558763 PRSS42Q7Z5A4 293 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 VRK2Q86Y07 508 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 D2HGDHQ8N465 521 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 METTL27Q8N6F8 245 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-207ENST00000558763 HDAC2Q92769 488 aaKnown RBP12.06□□□□□ -0.48
SMAD3-207ENST00000558763 ARHGDIGQ99819 225 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF350Q9GZX5 532 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 PIGUQ9H490 435 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 CXorf21Q9HAI6 301 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 ADAP2Q9NPF8 381 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 CLCA2Q9UQC9 943 aa12.06□□□□□ -0.48
SMAD3-207ENST00000558763 IGHV5-10-1A0A0J9YXX1 117 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SMIM31A0A1B0GVY4 71 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 NTN3O00634 580 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-207ENST00000558763 UGT2B11O75310 529 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 RFPL3O75679 317 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CDC123O75794 336 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-207ENST00000558763 ANXA8P13928 327 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 BTG2P78543 158 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 HSD11B2P80365 405 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 MAP4K2Q12851 820 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SQSTM1Q13501 440 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 ERV3-1Q14264 604 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 PHF19Q5T6S3 580 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 C16orf62Q7Z3J2 963 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF595Q8IYB9 648 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 OR4D9Q8NGE8 314 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SLC7A13Q8TCU3 470 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SLC9A6Q92581 669 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 HRASLS5Q96KN8 279 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CCDC74BQ96LY2 380 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 ALPK1Q96QP1 1244 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SDF2Q99470 211 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SPATA5L1Q9BVQ7 753 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 ING2Q9H160 280 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 DUSP22Q9NRW4 184 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CALML5Q9NZT1 146 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 AASSQ9UDR5 926 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 FAM32AQ9Y421 112 aaKnown RBP12.05□□□□□ -0.48
SMAD3-207ENST00000558763 A0A087WXM4 84 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 H0YIG0 161 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 HRKO00198 91 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CTNSO60931 367 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 AGR2O95994 175 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 MSL3P1P0C860 447 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 RPS4Y1P22090 263 aaKnown RBP12.05□□□□□ -0.48
SMAD3-207ENST00000558763 LIMK1P53667 647 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CLDN6P56747 220 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 IL1RL1Q01638 556 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 PIN1Q13526 163 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-207ENST00000558763 ATAD3BQ5T9A4 648 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 AP1ARQ63HQ0 302 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 NIPAL1Q6NVV3 410 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 DHRS4L2Q6PKH6 230 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 B3GNT8Q7Z7M8 397 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 VWA5B2Q8N398 1253 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 PARP8Q8N3A8 854 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CDRT4Q8N9R6 151 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 OR1L3Q8NH93 324 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CNIH3Q8TBE1 160 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms