RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ZCCHC18P0CG32 403 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 CCL3P10147 92 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 IL12BP29460 328 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 ADSLP30566 484 aaPredicted RBP16.05■□□□□ 0.16
TPM1-214ENST00000558544 KRT20P35900 424 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 RFX3P48380 749 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 PSPHP78330 225 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 MAPRE2Q15555 327 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 CYP27C1Q4G0S4 372 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 SLC25A25Q6KCM7 469 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 TNFAIP8L2Q6P589 184 aaPredicted RBP16.05■□□□□ 0.16
TPM1-214ENST00000558544 RETREG3Q86VR2 466 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 SNX32Q86XE0 403 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 RNF130Q86XS8 419 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 BCORP1Q8N888 145 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 GOLM1Q8NBJ4 401 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 ZFP90Q8TF47 636 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 TSPEARQ8WU66 669 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 CDS1Q92903 461 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 SLC35A4Q96G79 324 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 SCMH1Q96GD3 660 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 SGCZQ96LD1 299 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 STACQ99469 402 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 CCDC106Q9BWC9 280 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 MYLK2Q9H1R3 596 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 OR51I1Q9H343 314 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 PIGUQ9H490 435 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 TIMMDC1Q9NPL8 285 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 RYDENQ9NUL5 291 aaKnown RBP16.05■□□□□ 0.16
TPM1-214ENST00000558544 PCDHB14Q9Y5E9 798 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 NME2P1O60361 137 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 TSPAN2O60636 221 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 UGT2B11O75310 529 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 KCNH1O95259 989 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 NAGAP17050 411 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 HOXB9P17482 250 aaPredicted RBP16.04■□□□□ 0.16
TPM1-214ENST00000558544 NME2P22392 152 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 PIGAP37287 484 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 MAN2A2P49641 1150 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 MRPS22P82650 360 aaKnown RBP16.04■□□□□ 0.16
TPM1-214ENST00000558544 DECR1Q16698 335 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 LRIF1Q5T3J3 769 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 GKAP1Q5VSY0 366 aaPredicted RBP16.04■□□□□ 0.16
TPM1-214ENST00000558544 GALNTL5Q7Z4T8 443 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 GALNT10Q86SR1 603 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 TMEM178AQ8NBL3 297 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 BCAS4Q8TDM0 211 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 COL21A1Q96P44 957 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 PHF12Q96QT6 1004 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 ADOQ96SZ5 270 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 SH2D2AQ9NP31 389 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 DUSP22Q9NRW4 184 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 MAP10Q9P2G4 905 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 PCDHGA10Q9Y5H3 936 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 CHCHD2Q9Y6H1 151 aaPredicted RBP16.04■□□□□ 0.16
TPM1-214ENST00000558544 KCNE3Q9Y6H6 103 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 NCKAP5O14513 1909 aa16.04■□□□□ 0.16
TPM1-214ENST00000558544 LOC100653049A0A140TA62 436 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 OR6C70A6NIJ9 312 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 G3V3Y1 287 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 FBP2O00757 339 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 TP53I11O14683 189 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 KRT34O76011 436 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 SORBS2O94875 1100 aaKnown RBP16.03■□□□□ 0.16
TPM1-214ENST00000558544 KRT75O95678 551 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 IGKV1D-16P01601 117 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 KHKP50053 298 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 GPR85P60893 370 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 POU6F2P78424 691 aaPredicted RBP16.03■□□□□ 0.16
TPM1-214ENST00000558544 CCNJQ5T5M9 372 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 PRAMEF20Q5VT98 475 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 SLC22A10Q63ZE4 541 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 REP15Q6BDI9 236 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 FIGNL1Q6PIW4 674 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 DHDDSQ86SQ9 333 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 TREML1Q86YW5 311 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 MSRB3Q8IXL7 192 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 POU5F2Q8N7G0 328 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 MIPOL1Q8TD10 442 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 PAQR8Q8TEZ7 354 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 DIO2Q92813 273 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 HGDQ93099 445 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 BTBD2Q9BX70 525 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 TPT1P8Q9HAU6 139 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 IL1RL2Q9HB29 575 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 SACM1LQ9NTJ5 587 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 GIN1Q9NXP7 522 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 SLC25A37Q9NYZ2 338 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 ANAPC2Q9UJX6 822 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 MRTO4Q9UKD2 239 aaKnown RBP16.03■□□□□ 0.16
TPM1-214ENST00000558544 KLF13Q9Y2Y9 288 aaPredicted RBP16.03■□□□□ 0.16
TPM1-214ENST00000558544 PCDHGB6Q9Y5F9 930 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 CFAP46Q8IYW2 2715 aa16.03■□□□□ 0.16
TPM1-214ENST00000558544 A0A0G2JMM0 328 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 A0A1W2PPB8 328 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 A0A1W2PRS3 328 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 EIF4E1BA6NMX2 242 aaKnown RBP16.02■□□□□ 0.16
TPM1-214ENST00000558544 KIR3DP1A8MWS1 328 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 KCNK2O95069 426 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 IL33O95760 270 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms