RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 HS3ST3A1Q9Y663 406 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 TRIOBPQ9H2D6 2365 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 LRP4O75096 1905 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 A0A0J9YY10 115 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 PEX12O00623 359 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 PFDN1O60925 122 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 THY1P04216 161 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 CCNYL3P0C7X3 344 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 PRG2P13727 222 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 PORP16435 677 aaPredicted RBP9.87□□□□□ -0.83
TPM1-210ENST00000558264 SOX3P41225 446 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 ERV3-1Q14264 604 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 GNA13Q14344 377 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 MAPK14Q16539 360 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 PUS10Q3MIT2 529 aaKnown RBP9.87□□□□□ -0.83
TPM1-210ENST00000558264 ENTPD8Q5MY95 495 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 ZNF730Q6ZMV8 503 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 PLEKHM3Q6ZWE6 761 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 SHFQ7M4L6 423 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 SLC34A3Q8N130 599 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 MOAP1Q96BY2 351 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 TRNT1Q96Q11 434 aaKnown RBP9.87□□□□□ -0.83
TPM1-210ENST00000558264 BTBD2Q9BX70 525 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 NECTIN3Q9NQS3 549 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 HCN3Q9P1Z3 774 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 ENOPH1Q9UHY7 261 aa9.87□□□□□ -0.83
TPM1-210ENST00000558264 PNMA8CA0A1B0GUJ8 204 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 KRBA1A5PL33 1030 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 URADA6NGE7 173 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 CNOT3O75175 753 aaKnown RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 CYP7B1O75881 506 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 CDH3P22223 829 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 SMIM11AP58511 58 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 MAT1AQ00266 395 aaKnown RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 ZNF91Q05481 1191 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 PERM1Q5SV97 790 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 C12orf73Q69YU5 71 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 TYW3Q6IPR3 259 aaKnown RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 GALNT12Q8IXK2 581 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 OR2L13Q8N349 312 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 OR8D4Q8NGM9 314 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 TMEM255BQ8WV15 326 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 Q96MT0 163 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 MCHR1Q99705 422 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 TSSK6Q9BXA6 273 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 MIR1-1HGQ9H1L0 117 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 RERGLQ9H628 205 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 WSB2Q9NYS7 404 aaPredicted RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 ZNF443Q9Y2A4 671 aaPredicted RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 A0A0A6YYC8 382 aaPredicted RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 SLC9B1P1A6NJY1 282 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 I3L1I5 382 aaPredicted RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 WWP2O00308 870 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 CASC3O15234 703 aaKnown RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 ZSCAN9O15535 394 aaPredicted RBP9.86□□□□□ -0.83
TPM1-210ENST00000558264 SDC3O75056 442 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 MED26O95402 600 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 FUT1P19526 365 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 RGS6P49758 472 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 DGUOKQ16854 277 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 PLAG1Q6DJT9 500 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 ARMC6Q6NXE6 501 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 CDC73Q6P1J9 531 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 ZNF836Q6ZNA1 936 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 SLC46A3Q7Z3Q1 461 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 ZNF614Q8N883 585 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 TSTD1Q8NFU3 115 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 DIO2Q92813 273 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 KLHDC7BQ96G42 594 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 LRR1Q96L50 414 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 LMAN1LQ9HAT1 526 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 KLHL3Q9UH77 587 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 CARD8Q9Y2G2 431 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 IFT52Q9Y366 437 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 A0A0C4DFX4 3053 aa9.86□□□□□ -0.83
TPM1-210ENST00000558264 GXYLT2A0PJZ3 443 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 OR5K3A6NET4 321 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 EFCAB10A6NFE3 127 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 CYR61O00622 381 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 KPNA4O00629 521 aaPredicted RBP9.85□□□□□ -0.83
TPM1-210ENST00000558264 PRKNO60260 465 aaPredicted RBP9.85□□□□□ -0.83
TPM1-210ENST00000558264 WNT1P04628 370 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 CHRNB1P11230 501 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 BMP4P12644 408 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 ARFIP1P53367 373 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 UBXN2BQ14CS0 331 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 NNATQ16517 81 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 SNAPC1Q16533 368 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 ZNF628Q5EBL2 1059 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 RRM2BQ7LG56 351 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 ZAR1Q86SH2 424 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 OOSP2Q86WS3 158 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 CROCCP3Q8IVE0 287 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 CA13Q8N1Q1 262 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 GPR151Q8TDV0 419 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 FCGR1BQ92637 280 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 MGLLQ99685 303 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 ARHGDIGQ99819 225 aa9.85□□□□□ -0.83
TPM1-210ENST00000558264 SLIRPQ9GZT3 109 aaKnown RBP9.85□□□□□ -0.83
TPM1-210ENST00000558264 C6orf62Q9GZU0 229 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms