RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, human

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG11-208	ENST00000558155	POPDC3	Q9HBV1	291 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	GLRX2	Q9NS18	164 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	FAIM	Q9NVQ4	179 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	WHRN	Q9P202	907 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	FBXL2	Q9UKC9	423 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	ZNF337	Q9Y3M9	751 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	TSC22D4	Q9Y3Q8	395 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	PCDHGA11	Q9Y5H2	935 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	FREM1	Q5H8C1	2179 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155	PCNX3	Q9H6A9	2034 aa		4.65	□□□□□ -1.67
SPG11-208	ENST00000558155		A0A0A6YYD5	115 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	GOLGA6L10	A6NI86	522 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155		K7EPI3	171 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	T	O15178	435 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	SEC14L5	O43304	696 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	TMPRSS11D	O60235	418 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	GUCY1B2	O75343	617 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	EED	O75530	441 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	BCAS2	O75934	225 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	THBS1	P07996	1170 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CCDC166	P0CW27	439 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	SLC25A16	P16260	332 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	EPOR	P19235	508 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CSNK2A2	P19784	350 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PSMB1	P20618	241 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	HNF1A	P20823	631 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	GRK2	P25098	689 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	BSG	P35613	385 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	ELK3	P41970	407 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	NUDT6	P53370	316 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	SUCLG1	P53597	346 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PNLIPRP2	P54317	469 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CLDN15	P56746	228 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PSPH	P78330	225 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	POU4F1	Q01851	419 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	MGAT5	Q09328	741 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CUL3	Q13618	768 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	FRG1	Q14331	258 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	ZNF460	Q14592	562 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	RAB35	Q15286	201 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PPP1R7	Q15435	360 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	NNAT	Q16517	81 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PRICKLE4	Q2TBC4	344 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CTU2	Q2VPK5	515 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	ZNF672	Q499Z4	452 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	GLYR1	Q49A26	553 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	AGAP6	Q5VW22	663 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	RAET1L	Q5VY80	246 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	LIPJ	Q5W064	366 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	GRHL2	Q6ISB3	625 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	TTC27	Q6P3X3	843 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	BHLHB9	Q6PI77	547 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CCDC137	Q6PK04	289 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	FAM111B	Q6SJ93	734 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	C12orf54	Q6X4T0	127 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	ZC3HC1	Q86WB0	502 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	NUDT13	Q86X67	352 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	MYLK4	Q86YV6	388 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	IGDCC3	Q8IVU1	814 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PDIK1L	Q8N165	341 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	RNF175	Q8N4F7	328 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PDPR	Q8NCN5	879 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	FNDC9	Q8TBE3	224 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	STAG3L4	Q8TBR4	150 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	RNF217	Q8TC41	542 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	TMBIM1	Q969X1	311 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	TSPAN17	Q96FV3	270 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CFAP36	Q96G28	342 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	SLC35A4	Q96G79	324 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	ADO	Q96SZ5	270 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	NAP1L3	Q99457	506 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	MTERF1	Q99551	399 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	ITPA	Q9BY32	194 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PLA2G12A	Q9BZM1	189 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	DSN1	Q9H410	356 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PTGES2	Q9H7Z7	377 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	NSMCE4A	Q9NXX6	385 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	CISD1	Q9NZ45	108 aa	Known RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	AHSP	Q9NZD4	102 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	EHD3	Q9NZN3	535 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PPP4R1L	Q9P1A2	415 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	SLC17A6	Q9P2U8	582 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	OPTC	Q9UBM4	332 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	GDF2	Q9UK05	429 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	PSME2	Q9UL46	239 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	KCNS2	Q9ULS6	477 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	DTX4	Q9Y2E6	619 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	ANGPTL3	Q9Y5C1	460 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	AP4B1	Q9Y6B7	739 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	DYSF	O75923	2080 aa		4.64	□□□□□ -1.67
SPG11-208	ENST00000558155	MXRA5	Q9NR99	2828 aa		4.63	□□□□□ -1.67
SPG11-208	ENST00000558155	IGHV4-30-2	A0A087WSY4	118 aa		4.63	□□□□□ -1.67
SPG11-208	ENST00000558155	C1orf226	A1L170	272 aa		4.63	□□□□□ -1.67
SPG11-208	ENST00000558155	OR2M5	A3KFT3	312 aa		4.63	□□□□□ -1.67
SPG11-208	ENST00000558155	ELOA3D	A6NLF2	546 aa	Predicted RBP	4.63	□□□□□ -1.67

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