RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 NODALQ96S42 347 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 ACTRT3Q9BYD9 372 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 METTL7AQ9H8H3 244 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 AGPAT4Q9NRZ5 378 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 ASPDHA6ND91 283 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 OR6C70A6NIJ9 312 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 FAM166BA8MTA8 275 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 RFXANKO14593 260 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 WISP2O76076 250 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 NKX2-2O95096 273 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 CRYABP02511 175 aaKnown RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 C1QCP02747 245 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 UQCRC2P22695 453 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 MST1P26927 711 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 LSP1P33241 339 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 CHI3L1P36222 383 aaPredicted RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 MAP3K8P41279 467 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 KCNK10P57789 538 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 GNGT1P63211 74 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 MRPS22P82650 360 aaKnown RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 ALDH6A1Q02252 535 aaKnown RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 C6orf10Q5SRN2 563 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 CDC73Q6P1J9 531 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 ZCCHC12Q6PEW1 402 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 BHLHB9Q6PI77 547 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 FIGNL1Q6PIW4 674 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 SLC2A7Q6PXP3 512 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 GK5Q6ZS86 529 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 NUP54Q7Z3B4 507 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 COX18Q8N8Q8 333 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 OR5D16Q8NGK9 328 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 DNAJB8Q8NHS0 232 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 FAR1Q8WVX9 515 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 HOXB13Q92826 284 aaPredicted RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 CDS1Q92903 461 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 SPDL1Q96EA4 605 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 ITCHQ96J02 903 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 JSRP1Q96MG2 331 aaPredicted RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 FAM173AQ9BQD7 235 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 SLC35A5Q9BS91 424 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 DOHHQ9BU89 302 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 SERHL2Q9H4I8 314 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 RABEP2Q9H5N1 569 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 ZNF385DQ9H6B1 395 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 PROK2Q9HC23 129 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 TUBA8Q9NY65 449 aaPredicted RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 FLRT3Q9NZU0 649 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 CNIH4Q9P003 139 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 KLHL14Q9P2G3 628 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 VPS4AQ9UN37 437 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.16□□□□□ -0.3
USP3-205ENST00000557884 CROCCQ5TZA2 2017 aa13.16□□□□□ -0.3
USP3-205ENST00000557884 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 PRAMEF25A6NGN4 478 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 TTC36A6NLP5 189 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 NPIPA5E9PKD4 350 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 ICOSLGO75144 302 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 KCNH1O95259 989 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 IL33O95760 270 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 IGKV1D-16P01601 117 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 CYP4B1P13584 511 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 ZNF24P17028 368 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 CAPN3P20807 821 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 PSPHP78330 225 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 FOXK1P85037 733 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 EFR3AQ14156 821 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 RCAN2Q14206 197 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 GTDC1Q4AE62 458 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 EXOSC6Q5RKV6 272 aaKnown RBP13.15□□□□□ -0.3
USP3-205ENST00000557884 CCNJQ5T5M9 372 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 BLOC1S3Q6QNY0 202 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 ANGPTL8Q6UXH0 198 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 MSANTD1Q6ZTZ1 278 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 POGLUT1Q8NBL1 392 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 GOT1L1Q8NHS2 421 aaPredicted RBP13.15□□□□□ -0.3
USP3-205ENST00000557884 PNPT1Q8TCS8 783 aaKnown RBP13.15□□□□□ -0.3
USP3-205ENST00000557884 ADAMTS15Q8TE58 950 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 C10orf82Q8WW14 230 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 NR4A3Q92570 626 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 SLC35A4Q96G79 324 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 OR7D2Q96RA2 312 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 SECISBP2Q96T21 854 aaKnown RBP13.15□□□□□ -0.3
USP3-205ENST00000557884 BARD1Q99728 777 aaKnown RBP13.15□□□□□ -0.3
USP3-205ENST00000557884 RMND5AQ9H871 391 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 GALNT9Q9HCQ5 603 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 SLC6A13Q9NSD5 602 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 KLRF1Q9NZS2 232 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 NPIPA1Q9UND3 350 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 KCNE3Q9Y6H6 103 aa13.15□□□□□ -0.3
USP3-205ENST00000557884 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
USP3-205ENST00000557884 HS6ST1O60243 411 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 KCNK2O95069 426 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 ANP32DO95626 131 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 KRT16P08779 473 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 DRD4P21917 467 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 MATN1P21941 496 aa13.14□□□□□ -0.31
USP3-205ENST00000557884 CASP3P42574 277 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms