RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RILPQ96NA2 401 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 MS4A4EQ96PG1 132 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 DUSP26Q9BV47 211 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 DEFB127Q9H1M4 99 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 ZDHHC11Q9H8X9 412 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 PROK2Q9HC23 129 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 NEUROD4Q9HD90 331 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 INTS9Q9NV88 658 aaKnown RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 QPCTLQ9NXS2 382 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 ERRFI1Q9UJM3 462 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-211ENST00000557623 ZNF835Q9Y2P0 537 aa11.46□□□□□ -0.57
SLIRP-211ENST00000557623 UBR5O95071 2799 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-211ENST00000557623 RP1L1Q8IWN7 2480 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-211ENST00000557623 TRGV8A0A0C4DH27 118 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 PRRG2O14669 202 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 LRRTM2O43300 516 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 TSPAN2O60636 221 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 UGT2B11O75310 529 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 TRIM3O75382 744 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-211ENST00000557623 NME6O75414 186 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-211ENST00000557623 SASH3O75995 380 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 WISP2O76076 250 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 ELAVL4P26378 380 aaKnown RBP11.45□□□□□ -0.58
SLIRP-211ENST00000557623 PTGS2P35354 604 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 CA7P43166 264 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 PRIM2P49643 509 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 PRKAG1P54619 331 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 DECR1Q16698 335 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 DPY19L1Q2PZI1 675 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 PGS1Q32NB8 556 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 MTFR2Q6P444 385 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 ARHGAP11AQ6P4F7 1023 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 Q6ZPB1 254 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-211ENST00000557623 SZRD1Q7Z422 152 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 EID3Q8N140 333 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 CDRT4Q8N9R6 151 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 OR8J2Q8NGG1 315 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 PSMA8Q8TAA3 256 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 MOAP1Q96BY2 351 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 DTNBP1Q96EV8 351 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 NODALQ96S42 347 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 ADOQ96SZ5 270 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 OSBPL11Q9BXB4 747 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 KLRF1Q9NZS2 232 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 SUCOQ9UBS9 1254 aaKnown RBP11.45□□□□□ -0.58
SLIRP-211ENST00000557623 CBLCQ9ULV8 474 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 MYO18BQ8IUG5 2567 aa11.45□□□□□ -0.58
SLIRP-211ENST00000557623 POLEQ07864 2286 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 HIVEP3Q5T1R4 2406 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 A0A1B0GTH9 108 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 OR14I1A6ND48 311 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 PRAMEF25A6NGN4 478 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 CFLARO15519 480 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 SUSD5O60279 629 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 SOX30O94993 753 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 KCNH1O95259 989 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 C6orf47O95873 294 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 IGHG3P01860 377 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 EFNA1P20827 205 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 EPHA3P29320 983 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 GABRA3P34903 492 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 MAGEA5P43359 124 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 KIR3DL1P43629 444 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 HSF1Q00613 529 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 GAB1Q13480 694 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 ANXA8L1Q5VT79 327 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 C1QL3Q5VWW1 255 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 NXNQ6DKJ4 435 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 BHLHB9Q6PI77 547 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 FJX1Q86VR8 437 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 VPS37AQ8NEZ2 397 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 OR56A1Q8NGH5 318 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 SFXN5Q8TD22 340 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 ACTRT2Q8TDY3 377 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 HOXB13Q92826 284 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 TESCQ96BS2 214 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 FAM120BQ96EK7 910 aaKnown RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 MAELQ96JY0 434 aaKnown RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 LDAHQ9H6V9 325 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 WDR55Q9H6Y2 383 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 ZNF703Q9H7S9 590 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 EQTNQ9NQ60 294 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 SIRT3Q9NTG7 399 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 ZCCHC3Q9NUD5 404 aaKnown RBP11.44□□□□□ -0.58
SLIRP-211ENST00000557623 AIG1Q9NVV5 245 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 PCDHGB4Q9UN71 923 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 SNX8Q9Y5X2 465 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 DNAJC13O75165 2243 aa11.44□□□□□ -0.58
SLIRP-211ENST00000557623 ZNF407Q9C0G0 2248 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 TRGV5A0A0B4J1U4 118 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 GOLGA8QA0A0J9YX86 632 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 A0A1B0GVC2 190 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 GOLGA8OA6NCC3 632 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 WIPF3A6NGB9 483 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 LRRC3CA6NJW4 275 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 GOLGA8NF8WBI6 632 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 RNASET2O00584 256 aaKnown RBP11.43□□□□□ -0.58
SLIRP-211ENST00000557623 CCL21O00585 134 aa11.43□□□□□ -0.58
SLIRP-211ENST00000557623 ANKRD28O15084 1053 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms