RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ZNF671Q8TAW3 534 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 SUN5Q8TC36 379 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ART4Q93070 314 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CNRIP1Q96F85 164 aaPredicted RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TPD52L3Q96J77 140 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ELMO2Q96JJ3 720 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TNFRSF13CQ96RJ3 184 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CCDC77Q9BR77 488 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 SLC39A3Q9BRY0 314 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TTYH2Q9BSA4 534 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TMEM43Q9BTV4 400 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 RPP25Q9BUL9 199 aaKnown RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 DGCR6LQ9BY27 220 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 NFKBIZQ9BYH8 718 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TRIM9Q9C026 710 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 MMP28Q9H239 520 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 MED20Q9H944 212 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 FN3KRPQ9HA64 309 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 Q9HAA7 133 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 POLD4Q9HCU8 107 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 DCAF13Q9NV06 445 aaKnown RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 DUS2Q9NX74 493 aaKnown RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 TAS2R16Q9NYV7 291 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 KLRF1Q9NZS2 232 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 MBD2Q9UBB5 411 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CRLS1Q9UJA2 301 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 EMCNQ9ULC0 261 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ICAM5Q9UMF0 924 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 RNF6Q9Y252 685 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 GSTK1Q9Y2Q3 226 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 MRPS18CQ9Y3D5 142 aaKnown RBP2.67□□□□□ -1.98
TRAV28-201ENST00000557548 SLCO1B1Q9Y6L6 691 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 DCAF1Q9Y4B6 1507 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 AKNAQ7Z591 1439 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 ATP10DQ9P241 1426 aa2.67□□□□□ -1.98
TRAV28-201ENST00000557548 CECR2Q9BXF3 1484 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 IQCMA0A1B0GVH7 501 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ESYT2A0FGR8 921 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ARHGEF35A5YM69 484 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 FAM74A7A6NL05 159 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 PMS2P5A8MQ11 134 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 G3V2L1 256 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 BLOC1S5-TXNDC5H3BN57 136 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 K7EQD1 137 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 KIF2AO00139 706 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 FBP2O00757 339 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ACOT8O14734 319 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF749O43361 778 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 MED7O43513 233 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 SPOPO43791 374 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 PCDH7O60245 1069 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 LMX1BO60663 402 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 CIB2O75838 187 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 CEACAM4O75871 244 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 SLITRK3O94933 977 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 NTN1O95631 604 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 CDK4P11802 303 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 AOC1P19801 751 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 NCF2P19878 526 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 UCP1P25874 307 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 FCGR2CP31995 323 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 RPL9P32969 192 aaKnown RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 GRIA1P42261 906 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 PGFP49763 221 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 CRYBA2P53672 197 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 PLA2G16P53816 162 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 FOXG1P55316 489 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 HAND2P61296 217 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 SNRPD1P62314 119 aaKnown RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 PHEXP78562 749 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 EWSR1Q01844 656 aaKnown RBP eCLIP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 FGL1Q08830 312 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 BNIP1Q12981 228 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ELAVL3Q14576 367 aaKnown RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 TMEM187Q14656 261 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 EMC2Q15006 297 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 MLF2Q15773 248 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 SYPL1Q16563 259 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 KNOP1Q1ED39 458 aaKnown RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 FAM74A3Q4VXF1 159 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 CELF3Q5SZQ8 465 aaKnown RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 STPG1Q5TH74 334 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 WDR25Q64LD2 544 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 TMEM225Q6GV28 225 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 PWWP2BQ6NUJ5 590 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 KCNIP4Q6PIL6 250 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ATRAIDQ6UW56 229 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 TMEM184AQ6ZMB5 413 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ADAMTSL5Q6ZMM2 481 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 Q6ZRP5 223 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 TSEN54Q7Z6J9 526 aaKnown RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 KCNMB4Q86W47 210 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 TMEM17Q86X19 198 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 SLC38A6Q8IZM9 456 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 TMEM123Q8N131 208 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 OR5D13Q8NGL4 314 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 OR52J3Q8NH60 311 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 AGR3Q8TD06 166 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 C17orf50Q8WW18 174 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms