RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 MAPKAPK3Q16644 382 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 DEFB113Q30KQ7 82 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 FAM174BQ3ZCQ3 159 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 RABL3Q5HYI8 236 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 ADNP2Q6IQ32 1131 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 GALNTL5Q7Z4T8 443 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 CAMKMTQ7Z624 323 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 CD163Q86VB7 1156 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 CDC20BQ86Y33 519 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 LILRA2Q8N149 483 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 TTLQ8NG68 377 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 FAM57AQ8TBR7 257 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 GTF2H4Q92759 462 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 SLCO4A1Q96BD0 722 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 REPS1Q96D71 796 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 APIPQ96GX9 242 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 OR1F2PQ96R84 312 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 F2RL3Q96RI0 385 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 NR1H4Q96RI1 486 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-230ENST00000557427 PKP2Q99959 881 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 EFCAB11Q9BUY7 163 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 NT5DC2Q9H857 520 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 COPS7BQ9H9Q2 264 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-230ENST00000557427 MAPRE3Q9UPY8 281 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 DLGAP4Q9Y2H0 992 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 TSC22D4Q9Y3Q8 395 aa11.57□□□□□ -0.56
SHMT2-230ENST00000557427 MAGEB17A8MXT2 336 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 ARPC2O15144 300 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 ERN1O75460 977 aaKnown RBP11.56□□□□□ -0.56
SHMT2-230ENST00000557427 CLEC3AO75596 197 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 ATE1O95260 518 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 GPIP06744 558 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 UMPSP11172 480 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 PCNAP12004 261 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 RNH1P13489 461 aaKnown RBP11.56□□□□□ -0.56
SHMT2-230ENST00000557427 MAOAP21397 527 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 S100A3P33764 101 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 LAPTM5Q13571 262 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 BLMHQ13867 455 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 OR1C1Q15619 314 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 DPY19L1Q2PZI1 675 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 GRAMD1BQ3KR37 738 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 PAGE2BQ5JRK9 111 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 SPANXN4Q5MJ08 99 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 ACER2Q5QJU3 275 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 LRIF1Q5T3J3 769 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 NIPAL1Q6NVV3 410 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 NOXRED1Q6NXP6 359 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 H3F3CQ6NXT2 135 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 MED27Q6P2C8 311 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 PAMR1Q6UXH9 720 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 CYP2R1Q6VVX0 501 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 VN1R5Q7Z5H4 357 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 RIMKLAQ8IXN7 391 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 EID3Q8N140 333 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 CA13Q8N1Q1 262 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-230ENST00000557427 RND1Q92730 232 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 MS4A6EQ96DS6 147 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 SH3GL1Q99961 368 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 REXO4Q9GZR2 422 aaKnown RBP11.56□□□□□ -0.56
SHMT2-230ENST00000557427 RMND5AQ9H871 391 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 SIRT5Q9NXA8 310 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 SLAMF8Q9P0V8 285 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
SHMT2-230ENST00000557427 VPS29Q9UBQ0 182 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 MAGEL2Q9UJ55 1249 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
SHMT2-230ENST00000557427 A0A096LPI6 279 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 TRBV5-3A0A0A0MS03 114 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 A0A1B0GTH9 108 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 TCRBV5S2A0A599 114 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 DHRS12A0PJE2 317 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 H0YJX3 145 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 B3GALT2O43825 422 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 NEURL1O76050 574 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 MYO1DO94832 1006 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 TBX6O95947 436 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-230ENST00000557427 UQCRBP14927 111 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 PRPS1L1P21108 318 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 HSPA13P48723 471 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 AQP4P55087 323 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 MRPS35P82673 323 aaKnown RBP11.55□□□□□ -0.56
SHMT2-230ENST00000557427 LRRC36Q1X8D7 754 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 RUNDC3AQ59EK9 446 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 MTX3Q5HYI7 312 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 PAPD4Q6PIY7 484 aaKnown RBP11.55□□□□□ -0.56
SHMT2-230ENST00000557427 LAS2Q8IYD9 372 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 KRTCAP2Q8N6L1 136 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 ICA1LQ8NDH6 482 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 TNIP2Q8NFZ5 429 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 OR7G3Q8NG95 312 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 GAL3ST3Q96A11 431 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 C11orf24Q96F05 449 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-230ENST00000557427 ITCHQ96J02 903 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 LPAR4Q99677 370 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 PITHD1Q9GZP4 211 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-230ENST00000557427 VCXQ9H320 206 aa11.55□□□□□ -0.56
SHMT2-230ENST00000557427 CLK4Q9HAZ1 481 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms