RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	FES	P07332	822 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	SERPINA6	P08185	405 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	IGHV4-31	P0DP07	118 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLC25A16	P16260	332 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CPE	P16870	476 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ITGA2	P17301	1181 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CCND1	P24385	295 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	IGFBP5	P24593	272 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	IMPA1	P29218	277 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CCKAR	P32238	428 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CRHR1	P34998	444 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	GCK	P35557	465 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CCR8	P51685	355 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	PRAME	P78395	509 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLC13A2	Q13183	592 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	RUNX2	Q13950	521 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	SERTAD2	Q14140	314 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	FGFBP1	Q14512	234 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	NTRK2	Q16620	822 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	NRF1	Q16656	503 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	EIPR1	Q53HC9	387 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ACSBG2	Q5FVE4	666 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	DCST1	Q5T197	706 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	PRAMEF20	Q5VT98	475 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	TIGD3	Q6B0B8	471 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	OR2A2	Q6IF42	318 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	FAM166A	Q6J272	317 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ENPP6	Q6UWR7	440 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CLEC17A	Q6ZS10	378 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	FKBP9P1	Q75LS8	142 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF550	Q7Z398	422 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	KIAA1328	Q86T90	577 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	C17orf64	Q86WR6	236 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	RHOT2	Q8IXI1	618 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	GCNT2	Q8N0V5	402 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CA13	Q8N1Q1	262 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	TBC1D19	Q8N5T2	526 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	LRRC17	Q8N6Y2	441 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF321P	Q8N8H1	164 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	TRPV3	Q8NET8	790 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	OR10G3	Q8NGC4	313 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF721	Q8TF20	911 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CTHRC1	Q96CG8	243 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	SENP5	Q96HI0	755 aa	Predicted RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	HAUS8	Q9BT25	410 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ALOXE3	Q9BYJ1	711 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	OR8D2	Q9GZM6	311 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	REXO4	Q9GZR2	422 aa	Known RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	OR10A4	Q9H209	315 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	HSD3B7	Q9H2F3	369 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	RHBG	Q9H310	441 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	IFT22	Q9H7X7	185 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	EML4	Q9HC35	981 aa	Known RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	PRTFDC1	Q9NRG1	225 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ABCF3	Q9NUQ8	709 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	TES	Q9UGI8	421 aa	Known RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	PTBP2	Q9UKA9	531 aa	Known RBP	4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	KCNS2	Q9ULS6	477 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF148	Q9UQR1	794 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	DLGAP4	Q9Y2H0	992 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	C15orf41	Q9Y2V0	281 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	NOX1	Q9Y5S8	564 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	EML6	Q6ZMW3	1958 aa		4.22	□□□□□ -1.73
SCFD1-223	ENST00000557076	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	MED12L	Q86YW9	2145 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	ERI2	A8K979	691 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	ALG1L2	C9J202	215 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAM157A	C9JC47	383 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	PFDN6	O15212	129 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	SSX4	O60224	188 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CDH16	O75309	829 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	METTL18	O95568	372 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	ETHE1	O95571	254 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	SYF2	O95926	243 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	TGM6	O95932	706 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	IGLV2-14	P01704	120 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	IGKV3-11	P04433	115 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	SERPIND1	P05546	499 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CDH1	P12830	882 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	TNNI3	P19429	210 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	USF1	P22415	310 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	FMO4	P31512	558 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CDKN1A	P38936	164 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	KCNJ5	P48544	419 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CLRN1	P58418	232 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	EIF3E	P60228	445 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	RAB8A	P61006	207 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CCZ1B	P86790	482 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CCZ1	P86791	482 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	MYL5	Q02045	173 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CDH17	Q12864	832 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	BIK	Q13323	160 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	RCN2	Q14257	317 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	KCNJ11	Q14654	390 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	BCL2A1	Q16548	175 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	PGGHG	Q32M88	737 aa		4.21	□□□□□ -1.74

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