RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GLYATQ6IB77 296 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 RPL13AP3Q6NVV1 102 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ZBTB49Q6ZSB9 765 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 SPRED1Q7Z699 444 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TMEM200AQ86VY9 491 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF547Q8IVP9 402 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OR52M1Q8NGK5 317 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OR8K5Q8NH50 307 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OR10J5Q8NHC4 309 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 STOML3Q8TAV4 291 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 DPF1Q92782 380 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CPNE2Q96FN4 548 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 AURKBQ96GD4 344 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 MEGF10Q96KG7 1140 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FRG2BQ96QU4 278 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OSBPL11Q9BXB4 747 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 RMND5AQ9H871 391 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PLCXD1Q9NUJ7 323 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OLAHQ9NV23 265 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PPP4R1LQ9P1A2 415 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 STOX2Q9P2F5 926 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FOXD3Q9UJU5 478 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 UTS2RQ9UKP6 389 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PLEKHA6Q9Y2H5 1048 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PCDHB14Q9Y5E9 798 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TICRRQ7Z2Z1 1910 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF729A6NN14 1252 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 KPNA3O00505 521 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TFECO14948 347 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 SCN2BO60939 215 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FTH1P02794 183 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 LIPFP07098 398 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HIST1H2AGP0C0S8 130 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HIST1H2ADP20671 130 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PRPS1L1P21108 318 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FASP25445 335 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 RPL10P27635 214 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 NNMTP40261 264 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 KIR3DL2P43630 455 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 BDKRB1P46663 353 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 RPS14P62263 151 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 MC1RQ01726 317 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 RPL6Q02878 288 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 NAE1Q13564 534 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 IMPG1Q17R60 797 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HNRNPA1L2Q32P51 320 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 C2orf76Q3KRA6 126 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HSD17B12Q53GQ0 312 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 LDLRAP1Q5SW96 308 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TBPL2Q6SJ96 375 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 NDUFAF7Q7L592 441 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ANKRD46Q86W74 232 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 KLHDC8AQ8IYD2 350 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PHACTR4Q8IZ21 702 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ARMC10Q8N2F6 343 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OR2L8Q8NGY9 312 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OR10A6Q8NH74 314 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 UFD1Q92890 307 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FGF13Q92913 245 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CENPNQ96H22 339 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HIST1H2AHQ96KK5 128 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TSSK3Q96PN8 268 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FAM129BQ96TA1 746 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HIST1H2AJQ99878 128 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 INPP5KQ9BT40 448 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 H2AFJQ9BTM1 129 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 DPY30Q9C005 99 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HDHD2Q9H0R4 259 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 RBM38Q9H0Z9 239 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 KAT8Q9H7Z6 458 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PRDM8Q9NQV8 689 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ZCCHC3Q9NUD5 404 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 SH2B3Q9UQQ2 575 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 NCKAP1Q9Y2A7 1128 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 GOLT1BQ9Y3E0 138 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 F5P12259 2224 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 EDDM13A0A1B0GTR0 161 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 ANKDD1BA6NHY2 528 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 HEPACAM2A8MVW5 462 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 WWP2O00308 870 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 EI24O14681 340 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 WNT9AO14904 365 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 TBX1O43435 398 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 TLX3O43711 291 aaPredicted RBP4.8□□□□□ -1.64
TMEM260-210ENST00000556422 CPNE3O75131 537 aaKnown RBP4.8□□□□□ -1.64
TMEM260-210ENST00000556422 TNFAIP8O95379 198 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 C9P02748 559 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 STAG3L2P0CL84 134 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 ITGB7P26010 798 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 SOX9P48436 509 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 MTAPQ13126 283 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 TDGQ13569 410 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF234Q14588 700 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 ACOX1Q15067 660 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 MED22Q15528 200 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 SLC9A3R2Q15599 337 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 MAPK11Q15759 364 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF284Q2VY69 593 aa4.8□□□□□ -1.64
TMEM260-210ENST00000556422 C9orf50Q5SZB4 431 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms