RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RAB8BQ92930 207 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
ACTN1-218ENST00000556343 TMEM19Q96HH6 336 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 WDR77Q9BQA1 342 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-218ENST00000556343 TMEM121BQ9BXQ6 578 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-218ENST00000556343 WWTR1Q9GZV5 400 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 PCDHAC1Q9H158 963 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 ANKRA2Q9H9E1 313 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 HHATLQ9HCP6 504 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 ATP13A2Q9NQ11 1180 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 P4HTMQ9NXG6 502 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 TEKT2Q9UIF3 430 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 ANGPTL2Q9UKU9 493 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 BAG5Q9UL15 447 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 IFT52Q9Y366 437 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 RRP15Q9Y3B9 282 aaKnown RBP8.55□□□□□ -1.04
ACTN1-218ENST00000556343 WDR45Q9Y484 360 aa8.55□□□□□ -1.04
ACTN1-218ENST00000556343 COL27A1Q8IZC6 1860 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-218ENST00000556343 NUP214P35658 2090 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CDK2AP1O14519 115 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ARPC2O15144 300 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 TO15178 435 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 RRP8O43159 456 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SUV39H1O43463 412 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ABCB7O75027 752 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 FKBP6O75344 327 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 PGM3O95394 542 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 H6PDO95479 791 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ALPPP05187 535 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SERPINA7P05543 415 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 GPIP06744 558 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 LIFP15018 202 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 HPGDP15428 266 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 NAGAP17050 411 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 PSMA4P25789 261 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 IL12BP29460 328 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 MSX2P35548 267 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SOX11P35716 441 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 PIGAP37287 484 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 MAP3K8P41279 467 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 TMED10P49755 219 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CLK3P49761 638 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 NR0B1P51843 470 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 EFNA3P52797 238 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 FOXL2P58012 376 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 PSG6Q00889 435 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 MS4A2Q01362 244 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CHRNB3Q05901 458 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 EFR3AQ14156 821 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 LARS2Q15031 903 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 EBPQ15125 230 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SYPL1Q16563 259 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 LRRC23Q53EV4 343 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CRB2Q5IJ48 1285 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 EXOSC6Q5RKV6 272 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 HEPHL1Q6MZM0 1159 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CYP2R1Q6VVX0 501 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 MRGPREQ86SM8 312 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SPPL2CQ8IUH8 684 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 DND1Q8IYX4 353 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ZNF619Q8N2I2 560 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SLC5A8Q8N695 610 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ZNF527Q8NB42 609 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CLEC1AQ8NC01 280 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 APCDD1LQ8NCL9 501 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ELP5Q8TE02 316 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 MAL2Q969L2 176 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 IMMP1LQ96LU5 166 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SDF2Q99470 211 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ITPAQ9BY32 194 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 EVA1AQ9H8M9 152 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ZNF160Q9HCG1 818 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 DCAF13Q9NV06 445 aaKnown RBP8.54□□□□□ -1.04
ACTN1-218ENST00000556343 OLAHQ9NV23 265 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 KLHL28Q9NXS3 571 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 ABI3Q9P2A4 366 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 SEC14L3Q9UDX4 400 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 FBXL4Q9UKA2 621 aa8.54□□□□□ -1.04
ACTN1-218ENST00000556343 CDC14CA4D256 554 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 H3BNH8 94 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 M0QX08 132 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 REM1O75628 298 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 KCNK2O95069 426 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 IL33O95760 270 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 SERPINA1P01009 418 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CLPSP04118 112 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 DBIP07108 87 aaKnown RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CT45A8P0DMV1 189 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CT45A9P0DMV2 189 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 NCK1P16333 377 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 F8A1P23610 371 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 SOX18P35713 384 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 RFX3P48380 749 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 SELENOWP63302 87 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ELF3P78545 371 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 RHDQ02161 417 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 PLCXD2Q0VAA5 305 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms