RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CBLCQ9ULV8 474 aa11.54□□□□□ -0.56
HNRNPC-221ENST00000555883 ABCG2Q9UNQ0 655 aa11.54□□□□□ -0.56
HNRNPC-221ENST00000555883 MAPRE3Q9UPY8 281 aa11.54□□□□□ -0.56
HNRNPC-221ENST00000555883 TIMM22Q9Y584 194 aa11.54□□□□□ -0.56
HNRNPC-221ENST00000555883 HRNRQ86YZ3 2850 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 TUBAL3A6NHL2 446 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 TTC36A6NLP5 189 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 GOLGA8RI6L899 631 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 PROCP04070 461 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 FAM153BP0C7A2 387 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 EPXP11678 715 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 ZNF708P17019 499 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 PRPH2P23942 346 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 CCT5P48643 541 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 LHX2P50458 406 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 IST1P53990 364 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 DSCR4P56555 118 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 WNT3P56703 355 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 PSG6Q00889 435 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 GAB1Q13480 694 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 GANABQ14697 944 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 FAM153CQ494X1 144 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 SPDYAQ5MJ70 313 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 FAM71E1Q6IPT2 247 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 LARP4Q71RC2 724 aaKnown RBP eCLIP11.53□□□□□ -0.563e-11■■□□□ 11.8
HNRNPC-221ENST00000555883 TRIM42Q8IWZ5 723 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 OR2L13Q8N349 312 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 C9orf106Q8NAJ2 232 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.53□□□□□ -0.563e-6■■■■■ 50.8
HNRNPC-221ENST00000555883 KAT2AQ92830 837 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 RMND5BQ96G75 393 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 BBS4Q96RK4 519 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 KCNA7Q96RP8 456 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 TUBA1CQ9BQE3 449 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 GPATCH1Q9BRR8 931 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 G6PC3Q9BUM1 346 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 PIGMQ9H3S5 423 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 ANKRA2Q9H9E1 313 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 MIEF1Q9NQG6 463 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 CLCF1Q9UBD9 225 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 ST6GALNAC2Q9UJ37 374 aa11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 C19orf53Q9UNZ5 99 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-221ENST00000555883 SPG11Q96JI7 2443 aa11.52□□□□□ -0.56
HNRNPC-221ENST00000555883 ZFHX3Q15911 3703 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 C2orf72A6NCS6 295 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 H0Y3Z8 333 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 LINC01387J3KSC0 135 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 HCRTR2O43614 444 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 PLIN3O60664 434 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 CRHP06850 196 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 UROSP10746 265 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 GRK2P25098 689 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 TACR1P25103 407 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 NTSP30990 170 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 EVI2BP34910 448 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 CRHR1P34998 444 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 SLCO1A2P46721 670 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 FOXA1P55317 472 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 CLDN18P56856 261 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 OCRLQ01968 901 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 IMPG1Q17R60 797 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 FAM219BQ5XKK7 198 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 CAMKMTQ7Z624 323 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 FADS6Q8N9I5 356 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 CHDHQ8NE62 594 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 GOT1L1Q8NHS2 421 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 MBD6Q96DN6 1003 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 ALPK1Q96QP1 1244 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 EBPLQ9BY08 206 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 HHATLQ9HCP6 504 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 SDHAF3Q9NRP4 125 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 OXSMQ9NWU1 459 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 TBK1Q9UHD2 729 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 FBXL2Q9UKC9 423 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 MRTO4Q9UKD2 239 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 OR10H1Q9Y4A9 318 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 CCL27Q9Y4X3 112 aa11.52□□□□□ -0.57
HNRNPC-221ENST00000555883 A0A1W2PPM1 405 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 CLCA1A8K7I4 914 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 EEF1E1-BLOC1S5C9J1V9 151 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 UPK1AO00322 258 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 EEF1E1O43324 174 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 FADS1O60427 444 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 ZIC3O60481 467 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 TBX19O60806 448 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 DPP4P27487 766 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 MC3RP41968 323 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 NCBP2P52298 156 aaKnown RBP eCLIP11.51□□□□□ -0.576e-71■■■□□ 15.1
HNRNPC-221ENST00000555883 DGKQP52824 942 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 PSMD4P55036 377 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 C2orf80Q0P641 193 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 KIAA0040Q15053 153 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 CFAP157Q5JU67 520 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 NOXRED1Q6NXP6 359 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 CDC20BQ86Y33 519 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms