RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CCDC116Q8IYX3 515 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 CAMKK1Q8N5S9 505 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 AMER3Q8N944 861 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 FAM181AQ8N9Y4 354 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 TP53I13Q8NBR0 393 aaPredicted RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 OR2A1Q8NGT9 310 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 OR6F1Q8NGZ6 308 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 OR8K5Q8NH50 307 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 ENKURQ8TC29 256 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 GATAD2BQ8WXI9 593 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 SMARCD2Q92925 531 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 UCN3Q969E3 161 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 TP53INP1Q96A56 240 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 ZNF707Q96C28 371 aaPredicted RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 MS4A6EQ96DS6 147 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 FAM46AQ96IP4 442 aaKnown RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 OR7D2Q96RA2 312 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 INSM2Q96T92 566 aaPredicted RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 TIMM29Q9BSF4 260 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 TRMT61BQ9BVS5 477 aaKnown RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 PLA2G12AQ9BZM1 189 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 BTBD1Q9H0C5 482 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 TP63Q9H3D4 680 aaPredicted RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 XKR8Q9H6D3 395 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 EGLN3Q9H6Z9 239 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 SYNDIG1Q9H7V2 258 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 EQTNQ9NQ60 294 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 MED17Q9NVC6 651 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 LYARQ9NX58 379 aaKnown RBP6.57□□□□□ -1.36
TDP1-213ENST00000555880 CLCA2Q9UQC9 943 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 CARD8Q9Y2G2 431 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 GPR52Q9Y2T5 361 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 OR1A2Q9Y585 309 aa6.57□□□□□ -1.36
TDP1-213ENST00000555880 A0A087WUU8 490 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 IGKV1-8A0A0C4DH67 115 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 A0A1W2PR48 441 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MEIOCA2RUB1 952 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 HMX3A6NHT5 357 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 DUXAA6NLW8 204 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CPSF4LA6NMK7 179 aaKnown RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 KDM4EB2RXH2 506 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 FAM47E-STBD1D6RA91 191 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 PGRMC2O15173 223 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 KCNJ13O60928 360 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 PRKRAO75569 313 aaKnown RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 APOL3O95236 402 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 AGR2O95994 175 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 STATHP02808 62 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 HLA-DPB1P04440 258 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CHRM5P08912 532 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 MSL3P1P0C860 447 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ALPPL2P10696 532 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CFL1P23528 166 aaKnown RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 FPR3P25089 353 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CERS1P27544 350 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 TEAD1P28347 426 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CMPK1P30085 196 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 PRKAR1BP31321 381 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 FGF9P31371 208 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 MC3RP41968 323 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 STAT5AP42229 794 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 IL12RB1P42701 662 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 AVPR1BP47901 424 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 RFX2P48378 723 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 TGM4P49221 684 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 INPP1P49441 399 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MAN2A2P49641 1150 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 RPS25P62851 125 aaKnown RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 EFNB1P98172 346 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 FUT5Q11128 374 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 HYAL2Q12891 473 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SGCGQ13326 291 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 QPRTQ15274 297 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 IRF4Q15306 451 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MLF2Q15773 248 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 ZIC1Q15915 447 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 TBRG1Q3YBR2 411 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 GLYR1Q49A26 553 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 CLEC12AQ5QGZ9 265 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 OR2G6Q5TZ20 316 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 NXNL2Q5VZ03 156 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MZT2BQ6NZ67 158 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SLC48A1Q6P1K1 146 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MZT2AQ6P582 158 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ABHD17CQ6PCB6 329 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MTSS1LQ765P7 747 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 OLIG3Q7RTU3 272 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MRGPREQ86SM8 312 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SLC7A5P1Q8MH63 180 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 KLHL36Q8N4N3 616 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 DNAJC5GQ8N7S2 189 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 C19orf18Q8NEA5 215 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 NUP43Q8NFH3 380 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 TOR1AIP2Q8NFQ8 470 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CNRIP1Q96F85 164 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 NEDD4LQ96PU5 975 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 DEPDC7Q96QD5 511 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 GPA33Q99795 319 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ARHGDIGQ99819 225 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 KATNB1Q9BVA0 655 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms