RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CEP70Q8NHQ1 597 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ZFP28Q8NHY6 868 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 HOXB13Q92826 284 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 ABTB1Q969K4 478 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 ZBED6CLQ96FA7 236 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 LURAP1Q96LR2 239 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ZFP3Q96NJ6 502 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ZIM3Q96PE6 472 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 FAM111AQ96PZ2 611 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 UCN2Q96RP3 112 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ADOQ96SZ5 270 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 LMF2Q9BU23 707 aaKnown RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 UGT2B28Q9BY64 529 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 TUBB1Q9H4B7 451 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 GLIPR2Q9H4G4 154 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 REEP4Q9H6H4 257 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ANKRA2Q9H9E1 313 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 C3orf14Q9HBI5 128 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 MCCC2Q9HCC0 563 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 GALNT9Q9HCQ5 603 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 Q9N2J8 555 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 SDHAF3Q9NRP4 125 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 ACSS1Q9NUB1 689 aaPredicted RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 DDX18Q9NVP1 670 aaKnown RBP10.79□□□□□ -0.68
VRK1-204ENST00000555351 TNFRSF10DQ9UBN6 386 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 OR10H1Q9Y4A9 318 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 TRAF6Q9Y4K3 522 aa10.79□□□□□ -0.68
VRK1-204ENST00000555351 NKX2-6A6NCS4 301 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 MBD3L4A6NDZ8 208 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 MBD3L3A6NE82 208 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 MBD3L5A6NJ08 208 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 FAM90A27PA6NNH2 459 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 TMEM114B3SHH9 223 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 PDPK1O15530 556 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 TYROBPO43914 113 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 SNUPNO95149 360 aaKnown RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 SNRPB2P08579 225 aaKnown RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 SDC1P18827 310 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 CHMP24386 653 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 TACR1P25103 407 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 MAPK1P28482 360 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 MAP3K8P41279 467 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 MC3RP41968 323 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 GAS1P54826 345 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 EEF1A1P68104 462 aaKnown RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 ZNF155Q12901 538 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 MLC1Q15049 377 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 TOMM20Q15388 145 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 BCL2A1Q16548 175 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 DECR1Q16698 335 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 PRSS53Q2L4Q9 553 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 VPS26BQ4G0F5 336 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 RFTN2Q52LD8 501 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 ARL13AQ5H913 290 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 EEF1A1P5Q5VTE0 462 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 ENPP6Q6UWR7 440 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 TMEM107Q6UX40 140 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 R3HCC1LQ7Z5L2 792 aaKnown RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 NATD1Q8N6N6 113 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 OR2T11Q8NH01 316 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 MBD3L2Q8NHZ7 208 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 CDC26Q8NHZ8 85 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 TCP10LQ8TDR4 215 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 TWIST2Q8WVJ9 160 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 PPCDCQ96CD2 204 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 LRRC46Q96FV0 321 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 WDYHV1Q96HA8 205 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 EGLN2Q96KS0 407 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 PPP3R2Q96LZ3 170 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 UCK2Q9BZX2 261 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 SSU72Q9NP77 194 aaKnown RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 SERHLQ9NQF3 203 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 FAM120CQ9NX05 1096 aaKnown RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 ALKBH4Q9NXW9 302 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 SLC17A7Q9P2U7 560 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 FOXD3Q9UJU5 478 aaPredicted RBP10.78□□□□□ -0.68
VRK1-204ENST00000555351 FBN2P35556 2912 aa10.78□□□□□ -0.68
VRK1-204ENST00000555351 LINC01387J3KSC0 135 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 SYT5O00445 386 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 DVL2O14641 736 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 FADS1O60427 444 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 SOX30O94993 753 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 IL33O95760 270 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 IL18BPO95998 194 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 IL2RAP01589 272 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 CHRNGP07510 517 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 BPGMP07738 259 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 LINC00032P0C843 101 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 PRPS2P11908 318 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 GRK2P25098 689 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 LCN1P31025 176 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 ETV4P43268 484 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 CLK3P49761 638 aaKnown RBP10.77□□□□□ -0.69
VRK1-204ENST00000555351 GFRA1P56159 465 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 RCAN2Q14206 197 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 GANABQ14697 944 aaKnown RBP10.77□□□□□ -0.69
VRK1-204ENST00000555351 SMU1Q2TAY7 513 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 EIPR1Q53HC9 387 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 XKR7Q5GH72 579 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 WIPI1Q5MNZ9 446 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms