RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SLC11A1P49279 550 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 RPS4XP62701 263 aaKnown RBP4.53□□□□□ -1.68
VRK1-203ENST00000555067 HERVK_113P63132 956 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 ERVK-8P63133 956 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 ENPEPQ07075 957 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 CNTN1Q12860 1018 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 DRP2Q13474 957 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 WDR43Q15061 677 aaKnown RBP eCLIP4.53□□□□□ -1.68
VRK1-203ENST00000555067 EXT1Q16394 746 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 FBXO48Q5FWF7 155 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 SPANXN2Q5MJ10 180 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 PLPP4Q5VZY2 271 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 KIF6Q6ZMV9 814 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 RFPL4BQ6ZWI9 263 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 ANO5Q75V66 913 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 BZW1Q7L1Q6 419 aaKnown RBP4.53□□□□□ -1.68
VRK1-203ENST00000555067 SPATA4Q8NEY3 305 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 OR5AU1Q8NGC0 362 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 TCP11Q8WWU5 503 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 ART5Q96L15 291 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 C4orf45Q96LM5 186 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 C12orf66Q96MD2 445 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 ANKRD27Q96NW4 1050 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 SLC39A3Q9BRY0 314 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 ERVK-6Q9BXR3 956 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 BICC1Q9H694 974 aaKnown RBP4.53□□□□□ -1.68
VRK1-203ENST00000555067 ZNHIT6Q9NWK9 470 aaKnown RBP4.53□□□□□ -1.68
VRK1-203ENST00000555067 PIPOXQ9P0Z9 390 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 POMT2Q9UKY4 750 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 GSTK1Q9Y2Q3 226 aa4.53□□□□□ -1.68
VRK1-203ENST00000555067 PPIAL4CA0A0B4J2A2 164 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 LRRC30A6NM36 301 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 SNTNA6NMZ2 147 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 H3BMH7 237 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 POLR3GO15318 223 aaPredicted RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 B4GAT1O43505 415 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 CDH16O75309 829 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 OTCP00480 354 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 PPIAL4GP0DN37 164 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 DBTP11182 482 aaKnown RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 UQCRBP14927 111 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 LAP3P28838 519 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 BMI1P35226 326 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 MAGEA8P43361 318 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 CDKN1BP46527 198 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 SGSHP51688 502 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 BTG1P62324 171 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 SRYQ05066 204 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 LIPEQ05469 1076 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 DNAJC3Q13217 504 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 KLF5Q13887 457 aaPredicted RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 TMEM44Q2T9K0 475 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 ZFP69Q49AA0 526 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 GGTA1PQ4G0N0 100 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 SLC25A53Q5H9E4 307 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 TTC19Q6DKK2 380 aaPredicted RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 TCEAL6Q6IPX3 200 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 CACUL1Q86Y37 369 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 PLD3Q8IV08 490 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 TEX26Q8N6G2 289 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 SYT14Q8NB59 555 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 OR8K3Q8NH51 312 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 ISG20Q96AZ6 181 aaKnown RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 SH3YL1Q96HL8 342 aaPredicted RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 AKR1E2Q96JD6 320 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 IFT74Q96LB3 600 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 OPRPNQ99935 248 aaPredicted RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 STRADBQ9C0K7 418 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 IL1RL2Q9HB29 575 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 ZBTB20Q9HC78 741 aaPredicted RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 SMOXQ9NWM0 555 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 C1orf123Q9NWV4 160 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 PIGLQ9Y2B2 252 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 MRPL11Q9Y3B7 192 aaKnown RBP4.52□□□□□ -1.69
VRK1-203ENST00000555067 WDR45Q9Y484 360 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 COMMD3-BMI1R4GMX3 469 aa4.52□□□□□ -1.69
VRK1-203ENST00000555067 A0A1B0GVL5 298 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 SHISA7A6NL88 538 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 SNURFLB1AK76 121 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 GOLGA8SH3BPF8 625 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 BTN3A3O00478 584 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 IMPA2O14732 288 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 TIMM8AO60220 97 aaPredicted RBP4.51□□□□□ -1.69
VRK1-203ENST00000555067 UPK3AO75631 287 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 NPPAP01160 153 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 NR3C1P04150 777 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 AZU1P20160 251 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 CTNNA2P26232 953 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 NMT1P30419 496 aaKnown RBP4.51□□□□□ -1.69
VRK1-203ENST00000555067 MAT2AP31153 395 aaKnown RBP4.51□□□□□ -1.69
VRK1-203ENST00000555067 CCT3P49368 545 aaKnown RBP4.51□□□□□ -1.69
VRK1-203ENST00000555067 DNA2P51530 1060 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 PLA2G16P53816 162 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 CDH4P55283 916 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 OR1D5P58170 312 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 MRPS6P82932 125 aaKnown RBP4.51□□□□□ -1.69
VRK1-203ENST00000555067 GRB14Q14449 540 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 C3AR1Q16581 482 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 MAPK6Q16659 721 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 CTSL3PQ5NE16 218 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms