RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 IFI6P09912 130 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 NAGAP17050 411 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 RFX3P48380 749 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 AQP5P55064 265 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 CASP9P55211 416 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 RPS26P62854 115 aaKnown RBP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 SF3A3Q12874 501 aaKnown RBP eCLIP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 C3AR1Q16581 482 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 FAM174BQ3ZCQ3 159 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 RGS9BPQ6ZS82 235 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 GK5Q6ZS86 529 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 NCCRP1Q6ZVX7 275 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 NUP54Q7Z3B4 507 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 DND1Q8IYX4 353 aaKnown RBP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 POGLUT1Q8NBL1 392 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 RFWD2Q8NHY2 731 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 SLC9A6Q92581 669 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 RMND5BQ96G75 393 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 SLC35A4Q96G79 324 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 COL21A1Q96P44 957 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 MS4A4EQ96PG1 132 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 INPP5KQ9BT40 448 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 DOHHQ9BU89 302 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 ACBD3Q9H3P7 528 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 ZNF703Q9H7S9 590 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 ZDHHC11Q9H8X9 412 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 IL1RL2Q9HB29 575 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 ZCCHC3Q9NUD5 404 aaKnown RBP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 ATAD3AQ9NVI7 634 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 GPATCH2Q9NW75 528 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 SH3BGRL2Q9UJC5 107 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 OR10H1Q9Y4A9 318 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 POLEQ07864 2286 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 RP1L1Q8IWN7 2480 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 A0A1B0GTH9 108 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 ANKRD33BA6NCL7 494 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 PRAMEF25A6NGN4 478 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 OR6C70A6NIJ9 312 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 CAPN14A8MX76 684 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 TP53I11O14683 189 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 CFLARO15519 480 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 EDF1O60869 148 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 HMGN2P05204 90 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 ENDOUP21128 410 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 SOAT1P35610 550 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 CDKN2CP42773 168 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 KIR3DL1P43629 444 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 CCT3P49368 545 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 TMED10P49755 219 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 GAS1P54826 345 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 MRPS22P82650 360 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 TP53BP2Q13625 1128 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 ELOAQ14241 798 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 LASP1Q14847 261 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 HYAL4Q2M3T9 481 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 PDCD4Q53EL6 469 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 CCNJQ5T5M9 372 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 FIGNL1Q6PIW4 674 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 PAOXQ6QHF9 649 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 OLIG3Q7RTU3 272 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 OR8J2Q8NGG1 315 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 OR4A15Q8NGL6 344 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 GPR151Q8TDV0 419 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 RNF138Q8WVD3 245 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 TESCQ96BS2 214 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 GNRHR2Q96P88 292 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 PRPF18Q99633 342 aaKnown RBP11.3□□□□□ -0.6
SYNE2-214ENST00000554928 OSBPL11Q9BXB4 747 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 SLC6A15Q9H2J7 730 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 METTL7AQ9H8H3 244 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 ZFP64Q9NPA5 681 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 TINAGQ9UJW2 476 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 CBLCQ9ULV8 474 aa11.3□□□□□ -0.6
SYNE2-214ENST00000554928 COL12A1Q99715 3063 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 USP9XQ93008 2570 aaPredicted RBP11.29□□□□□ -0.6
SYNE2-214ENST00000554928 ZGRF1Q86YA3 2104 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 RNASET2O00584 256 aaKnown RBP11.29□□□□□ -0.6
SYNE2-214ENST00000554928 UBDO15205 165 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 LRRTM2O43300 516 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 SLC19A2O60779 497 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 IL33O95760 270 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 STSP08842 583 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 IL12BP29460 328 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 S100A3P33764 101 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 MAN2A2P49641 1150 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 RNF144AP50876 292 aaPredicted RBP11.29□□□□□ -0.6
SYNE2-214ENST00000554928 CLNS1AP54105 237 aaKnown RBP11.29□□□□□ -0.6
SYNE2-214ENST00000554928 GUCY1A3Q02108 690 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 UBAP2LQ14157 1087 aaKnown RBP11.29□□□□□ -0.6
SYNE2-214ENST00000554928 SPDYE7PQ495Y7 208 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 CYP27C1Q4G0S4 372 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 KRTCAP3Q53RY4 240 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 OR5M10Q6IEU7 315 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 CGB2Q6NT52 195 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 ANGPTL8Q6UXH0 198 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 APOOLQ6UXV4 268 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms