RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 NEUROD4Q9HD90 331 aa10.45□□□□□ -0.74
SRP54-205ENST00000554803 ISYNA1Q9NPH2 558 aa10.45□□□□□ -0.74
SRP54-205ENST00000554803 TAS2R9Q9NYW1 312 aa10.45□□□□□ -0.74
SRP54-205ENST00000554803 SPATA7Q9P0W8 599 aa10.45□□□□□ -0.74
SRP54-205ENST00000554803 TMCC3Q9ULS5 477 aa10.45□□□□□ -0.74
SRP54-205ENST00000554803 OR1A2Q9Y585 309 aa10.45□□□□□ -0.74
SRP54-205ENST00000554803 DIDO1Q9BTC0 2240 aaKnown RBP10.45□□□□□ -0.74
SRP54-205ENST00000554803 GNG14A0A1W2PPG7 69 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 SLC5A10A0PJK1 596 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 FAM172BPA6NC97 362 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 ARHGEF33A8MVX0 844 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 YY2O15391 372 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 SLITRK5O94991 958 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 LGI1O95970 557 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 SCG5P05408 212 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 LCKP06239 509 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 GAAP10253 952 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 LIFP15018 202 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 CHMP24386 653 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 GADD45AP24522 165 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 CXCR2P25025 360 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 PTBP1P26599 531 aaKnown RBP eCLIP10.44□□□□□ -0.74
SRP54-205ENST00000554803 SLC15A1P46059 708 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 RPS5P46782 204 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 ANXA11P50995 505 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 CTSCP53634 463 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 RAE1P78406 368 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 CDK3Q00526 305 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 IFITM3Q01628 133 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 ALDH6A1Q02252 535 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 EEF1A2Q05639 463 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 RUNX1T1Q06455 604 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 ST3GAL4Q11206 333 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 C1orf61Q13536 156 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 TMEM44Q2T9K0 475 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 BCL7AQ4VC05 210 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 PRRT3Q5FWE3 981 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 TMEM164Q5U3C3 297 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 TMEM236Q5W0B7 351 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 ANKRD34AQ69YU3 496 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 SLCO4C1Q6ZQN7 724 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 TAGAPQ8N103 731 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 SLC5A8Q8N695 610 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 RASGEF1AQ8N9B8 481 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 GPBAR1Q8TDU6 330 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 NUDT8Q8WV74 236 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 EGLN2Q96KS0 407 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 DHRS1Q96LJ7 313 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 CEP19Q96LK0 163 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 SNX18Q96RF0 628 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 BARD1Q99728 777 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 SLC30A2Q9BRI3 323 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 SLC35A5Q9BS91 424 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 MND1Q9BWT6 205 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 TEX101Q9BY14 249 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 C6orf62Q9GZU0 229 aaPredicted RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 NUAK2Q9H093 628 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 OR2AG1Q9H205 316 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 A4GALTQ9NPC4 353 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 C1GALT1Q9NS00 363 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 RASSF1Q9NS23 344 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 FAM8A1Q9UBU6 413 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 TSR3Q9UJK0 312 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 TMEM98Q9Y2Y6 226 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 RPL36Q9Y3U8 105 aaKnown RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 PCDHGB6Q9Y5F9 930 aa10.44□□□□□ -0.74
SRP54-205ENST00000554803 PCYT1BQ9Y5K3 369 aaPredicted RBP10.44□□□□□ -0.74
SRP54-205ENST00000554803 FBN3Q75N90 2809 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 DSPPQ9NZW4 1301 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 C17orf113A0A1B0GUU1 675 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 IQCMA0A1B0GVH7 501 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 OR2AG2A6NM03 316 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 AGRPO00253 132 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 FAAHO00519 579 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 MAN1A2O60476 641 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 TRIM3O75382 744 aaPredicted RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 GADD45GO95257 159 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 CLDN1O95832 211 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 DLGAP3O95886 979 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 KRT8P05787 483 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 FURINP09958 794 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 C1GALT1C1LP0DN25 315 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 NR4A1P22736 598 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 PSMA1P25786 263 aaKnown RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 GRNP28799 593 aaKnown RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 CSTF2P33240 577 aaKnown RBP eCLIP10.43□□□□□ -0.74
SRP54-205ENST00000554803 TRIM23P36406 574 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 CRATP43155 626 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 MVDP53602 400 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 CRISP1P54107 249 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 LSM3P62310 102 aaKnown RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 NAE1Q13564 534 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 GNA13Q14344 377 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 OCLNQ16625 522 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 ZXDCQ2QGD7 858 aaPredicted RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 AGAP6Q5VW22 663 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 C1QL3Q5VWW1 255 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 STEAP3Q658P3 488 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 FAM71E1Q6IPT2 247 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms