RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SARAFQ96BY9 339 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 REPS1Q96D71 796 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 PANX3Q96QZ0 392 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 OR1F2PQ96R84 312 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 PIP5K1AQ99755 562 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 EBNA1BP2Q99848 306 aaKnown RBP4.47□□□□□ -1.69
ATXN3-228ENST00000554592 NAT10Q9H0A0 1025 aaKnown RBP4.47□□□□□ -1.69
ATXN3-228ENST00000554592 C10orf88Q9H8K7 445 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 ZDHHC11Q9H8X9 412 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 ANKHQ9HCJ1 492 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 ALKBH4Q9NXW9 302 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 HCN3Q9P1Z3 774 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 MTRF1LQ9UGC7 380 aaKnown RBP4.47□□□□□ -1.69
ATXN3-228ENST00000554592 PCYOX1Q9UHG3 505 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 NENFQ9UMX5 172 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 FAM215AQ9Y5M1 114 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 NFS1Q9Y697 457 aa4.47□□□□□ -1.69
ATXN3-228ENST00000554592 PCM1Q15154 2024 aa4.46□□□□□ -1.69
ATXN3-228ENST00000554592 hCG_1818297A0A087WSY0 165 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 OR51F1A6NGY5 319 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ARHGEF33A8MVX0 844 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 APOC4-APOC2K7ER74 178 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PRYO14603 147 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PRMT5O14744 637 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 P2RX6O15547 441 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PSMD3O43242 534 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SPOPO43791 374 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 KIF5CO60282 957 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF500O60304 480 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SMPD2O60906 423 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF189O75820 626 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 GOT2P00505 430 aaKnown RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 APOC2P02655 101 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 FHP07954 510 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 CSF1P09603 554 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ERGP11308 486 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 HRH2P25021 359 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 CTNNA2P26232 953 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 BDKRB1P46663 353 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ASCL1P50553 236 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 NR0B1P51843 470 aaKnown RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 TBX2Q13207 712 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 TSTA3Q13630 321 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 POU6F1Q14863 301 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SLC10A1Q14973 349 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SLC18A3Q16572 532 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 STX1AQ16623 288 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PARP6Q2NL67 630 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 FASTKD1Q53R41 847 aaKnown RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 WLSQ5T9L3 541 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PTRHD1Q6GMV3 140 aaKnown RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 HMBOX1Q6NT76 420 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PODNL1Q6PEZ8 512 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 AFTPHQ6ULP2 937 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SUSD1Q6UWL2 747 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 C16orf47Q6ZP98 133 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 DCDC5Q6ZRR9 648 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 OTOAQ7RTW8 1153 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 MDGA2Q7Z553 956 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ADCK2Q7Z695 626 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PLD3Q8IV08 490 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 CDKL3Q8IVW4 592 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PHC2Q8IXK0 858 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 GPALPP1Q8IXQ4 340 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 LAS2Q8IYD9 372 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 KRT222Q8N1A0 295 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 CAMKVQ8NCB2 501 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 NFAM1Q8NET5 270 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 OR4L1Q8NH43 312 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 LINC01560Q8TB33 94 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 LKAAEAR1Q8TD35 194 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 HTRA1Q92743 480 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 TSLPQ969D9 159 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 HAUS1Q96CS2 278 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 DAZAP1Q96EP5 407 aaKnown RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 MPP4Q96JB8 637 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 HS6ST2Q96MM7 605 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PRAP1Q96NZ9 151 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 PANX2Q96RD6 677 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 NPAS1Q99742 590 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SH3GL2Q99962 352 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 FAM129AQ9BZQ8 928 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 LRRC40Q9H9A6 602 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 TMEM184CQ9NVA4 438 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF629Q9UEG4 869 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 TAC3Q9UHF0 121 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ANAPC5Q9UJX4 755 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SLC13A4Q9UKG4 626 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 ERVK-11Q9UQG0 969 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 YARS2Q9Y2Z4 477 aaKnown RBP4.46□□□□□ -1.7
ATXN3-228ENST00000554592 SLC22A7Q9Y694 548 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 CCDC88CQ9P219 2028 aa4.46□□□□□ -1.7
ATXN3-228ENST00000554592 CACNA1CQ13936 2221 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 PINLYPA6NC86 204 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SAGE2PA6NJ88 616 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CGB1A6NKQ9 187 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 FAM166BA8MTA8 275 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 J3KRW8 73 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CLDN4O14493 209 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms