RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 HOMER3Q9NSC5 361 aa4.12□□□□□ -1.75
CHD8-207ENST00000554384 RARRES3Q9UL19 164 aa4.12□□□□□ -1.75
CHD8-207ENST00000554384 FAM205AQ6ZU69 1335 aa4.12□□□□□ -1.75
CHD8-207ENST00000554384 NSD2O96028 1365 aa4.12□□□□□ -1.75
CHD8-207ENST00000554384 USP47Q96K76 1375 aa4.12□□□□□ -1.75
CHD8-207ENST00000554384 IGHV3-16A0A0C4DH30 117 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 SRRM5B3KS81 715 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 C19orf81C9J6K1 198 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 LMO2P25791 158 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 TMOD1P28289 359 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 CHRNA3P32297 505 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 RFTN1Q14699 578 aaPredicted RBP4.11□□□□□ -1.75
CHD8-207ENST00000554384 LPAL2Q16609 132 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 RHBDD2Q6NTF9 364 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 FAAP20Q6NZ36 180 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 EMBQ6PCB8 327 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 RFWD3Q6PCD5 774 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 ADAMTSL5Q6ZMM2 481 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 ZNF841Q6ZN19 808 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 LUZP1Q86V48 1076 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 C4orf32Q8N8J7 132 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 ZNF397Q8NF99 534 aaPredicted RBP4.11□□□□□ -1.75
CHD8-207ENST00000554384 TAF15Q92804 592 aaKnown RBP eCLIP4.11□□□□□ -1.75
CHD8-207ENST00000554384 NTNG2Q96CW9 530 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 FTHL17Q9BXU8 183 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 RNF41Q9H4P4 317 aaPredicted RBP4.11□□□□□ -1.75
CHD8-207ENST00000554384 NGBQ9NPG2 151 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 GTSE1Q9NYZ3 720 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 SPATA2Q9UM82 520 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 ANKRD36BQ8N2N9 1353 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 CCDC7Q96M83 1385 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 VPS8Q8N3P4 1428 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 ABCC6O95255 1503 aa4.11□□□□□ -1.75
CHD8-207ENST00000554384 LTBP1Q14766 1721 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 N4BP2Q86UW6 1770 aaPredicted RBP4.1□□□□□ -1.75
CHD8-207ENST00000554384 RANBP6O60518 1105 aaKnown RBP4.1□□□□□ -1.75
CHD8-207ENST00000554384 VENTXO95231 258 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 IGHV3-13P01766 116 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 APRTP07741 180 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 UCP1P25874 307 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 PRDX2P32119 198 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 HMGCLP35914 325 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 VEGFCP49767 419 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 CSRP3P50461 194 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 SGSHP51688 502 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 MYBPC1Q00872 1141 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 NAAAQ02083 359 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 GABPB1Q06547 395 aaPredicted RBP4.1□□□□□ -1.75
CHD8-207ENST00000554384 SPP2Q13103 211 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 ZNF699Q32M78 642 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 TOR1AIP1Q5JTV8 583 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 DDI2Q5TDH0 399 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 STXBP4Q6ZWJ1 553 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 SLC47A2Q86VL8 602 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 CNNM3Q8NE01 707 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 ATF6BQ99941 703 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 ST6GALNAC5Q9BVH7 336 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 TMEM231Q9H6L2 316 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 ALG9Q9H6U8 611 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 HOOK1Q9UJC3 728 aaKnown RBP4.1□□□□□ -1.75
CHD8-207ENST00000554384 UBE4BO95155 1302 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 SZT2Q5T011 3432 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 EIF3AQ14152 1382 aaKnown RBP4.1□□□□□ -1.75
CHD8-207ENST00000554384 COL6A3P12111 3177 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 PIK3C2AO00443 1686 aa4.1□□□□□ -1.75
CHD8-207ENST00000554384 COL18A1P39060 1754 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 VIRMAQ69YN4 1812 aaKnown RBP4.09□□□□□ -1.75
CHD8-207ENST00000554384 TDRD15B5MCY1 1934 aaKnown RBP4.09□□□□□ -1.75
CHD8-207ENST00000554384 A0A1B0GTH9 108 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 PHF1O43189 567 aaPredicted RBP4.09□□□□□ -1.75
CHD8-207ENST00000554384 HAND2P61296 217 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 CDKL1Q00532 357 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 PCK2Q16822 640 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 ANKRD55Q3KP44 614 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 SEL1L2Q5TEA6 688 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 AGAP7PQ5VUJ5 663 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 FAM219BQ5XKK7 198 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 FAM159AQ6UWV7 190 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 METTL7BQ6UX53 244 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 DPY19L2P2Q6ZN68 376 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 SLC25A42Q86VD7 318 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 PYROXD2Q8N2H3 581 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 RNF148Q8N7C7 305 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 MLKLQ8NB16 471 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 C17orf47Q8NEP4 570 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 OR56B1Q8NGI3 324 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 FCGR1BQ92637 280 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 BIRC7Q96CA5 298 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 APOOQ9BUR5 198 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 NACA2Q9H009 215 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 RAB17Q9H0T7 212 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 SP140LQ9H930 580 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 YAE1D1Q9NRH1 226 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 STARD5Q9NSY2 213 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 SEC14L4Q9UDX3 406 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 TUBGCP4Q9UGJ1 667 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 PALLDQ8WX93 1383 aa4.09□□□□□ -1.75
CHD8-207ENST00000554384 KDM6AO15550 1401 aaPredicted RBP4.09□□□□□ -1.75
CHD8-207ENST00000554384 ADAMTS7Q9UKP4 1686 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms