RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CANT1Q8WVQ1 401 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 PYDC1Q8WXC3 89 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 CDS1Q92903 461 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 VMP1Q96GC9 406 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 PYURFQ96I23 114 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 IP6K3Q96PC2 410 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 WDR77Q9BQA1 342 aaPredicted RBP7.1□□□□□ -1.27
TDP1-209ENST00000554180 DOHHQ9BU89 302 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 G6PC3Q9BUM1 346 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 SAP130Q9H0E3 1048 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 ZNF700Q9H0M5 742 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 SLC38A1Q9H2H9 487 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 RUBCNLQ9H714 662 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 TRIM45Q9H8W5 580 aaPredicted RBP7.1□□□□□ -1.27
TDP1-209ENST00000554180 CACYBPQ9HB71 228 aaKnown RBP7.1□□□□□ -1.27
TDP1-209ENST00000554180 ASCL3Q9NQ33 180 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 THSD1Q9NS62 852 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 BAG5Q9UL15 447 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 FARSAQ9Y285 508 aaKnown RBP7.1□□□□□ -1.27
TDP1-209ENST00000554180 DTX4Q9Y2E6 619 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 GPR55Q9Y2T6 319 aaPredicted RBP7.1□□□□□ -1.27
TDP1-209ENST00000554180 AP4S1Q9Y587 144 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
TDP1-209ENST00000554180 HS3ST3B1Q9Y662 390 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 KCNE3Q9Y6H6 103 aa7.1□□□□□ -1.27
TDP1-209ENST00000554180 IGHV1-45A0A0A0MS14 117 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 C2orf92A0A1B0GVN3 265 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 A8MUA0 341 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 H0Y3Z8 333 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 M0QX08 132 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SYT5O00445 386 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 TO15178 435 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 HNRNPRO43390 633 aaKnown RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 KIAA0513O60268 411 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 PRKD3O94806 890 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 KCNK2O95069 426 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 MFN2O95140 757 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ZNF682O95780 498 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SEMG1P04279 462 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 CHRM4P08173 479 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 CT45A8P0DMV1 189 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 CT45A9P0DMV2 189 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 LIPCP11150 499 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 COX6A1P12074 109 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ANPEPP15144 967 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ATP6V1C1P21283 382 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 RPS4Y1P22090 263 aaKnown RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 AQP1P29972 269 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 PRKAR1BP31321 381 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 GABRA3P34903 492 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ERFP50548 548 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 PSMD4P55036 377 aaKnown RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 FOXL2P58012 376 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SLC26A5P58743 744 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 CAMK2BQ13554 666 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 PCOLCEQ15113 449 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 DECR1Q16698 335 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.09□□□□□ -1.27
TDP1-209ENST00000554180 ZSWIM7Q19AV6 140 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 GLIPR1L2Q4G1C9 344 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 CT45A2Q5DJT8 189 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 RPS26P11Q5JNZ5 115 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 TBCELQ5QJ74 424 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 FBXW10Q5XX13 1052 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 HLA-DQA1Q5Y7H0 255 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 PLAG1Q6DJT9 500 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ENPP6Q6UWR7 440 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 NPSR1Q6W5P4 371 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 HSDL2Q6YN16 418 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 FRRS1Q6ZNA5 592 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 FKBP9P1Q75LS8 142 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 NDUFAF7Q7L592 441 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 WDR53Q7Z5U6 358 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 RAB43Q86YS6 212 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SLC44A2Q8IWA5 706 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 PEX5LQ8IYB4 626 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ZNF619Q8N2I2 560 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 PQLC1Q8N2U9 271 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ZNF441Q8N8Z8 693 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 OR11G2Q8NGC1 345 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 OR5L2Q8NGL0 311 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 FAM110BQ8TC76 370 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 DOK4Q8TEW6 326 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 GEMIN6Q8WXD5 167 aaKnown RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 ADIPOR1Q96A54 375 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 TP53INP1Q96A56 240 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 KIAA1143Q96AT1 154 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 SLCO4A1Q96BD0 722 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 TAMM41Q96BW9 452 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 NXPE2Q96DL1 559 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 HSPBAP1Q96EW2 488 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SLC47A1Q96FL8 570 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 OTUB1Q96FW1 271 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 RMND5BQ96G75 393 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 LCORQ96JN0 433 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 HSH2DQ96JZ2 352 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 COL21A1Q96P44 957 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SDF2Q99470 211 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 NUDT9Q9BW91 350 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 ITPAQ9BY32 194 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms