RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 HDDC3Q8N4P3 179 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ZNF511Q8NB15 262 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NLGN2Q8NFZ4 835 aa9□□□□□ -0.97
SIX4-202ENST00000554079 OR11G2Q8NGC1 345 aa9□□□□□ -0.97
SIX4-202ENST00000554079 OR52J3Q8NH60 311 aa9□□□□□ -0.97
SIX4-202ENST00000554079 GRAPLQ8TC17 118 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 FAM151AQ8WW52 585 aa9□□□□□ -0.97
SIX4-202ENST00000554079 GTPBP3Q969Y2 492 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 NTAN1Q96AB6 310 aa9□□□□□ -0.97
SIX4-202ENST00000554079 TAAR1Q96RJ0 339 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NPY6RQ99463 290 aa9□□□□□ -0.97
SIX4-202ENST00000554079 DPH2Q9BQC3 489 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 AARSD1Q9BTE6 412 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 MRPL37Q9BZE1 423 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 FAM117AQ9C073 453 aa9□□□□□ -0.97
SIX4-202ENST00000554079 COA1Q9GZY4 146 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ATXN3LQ9H3M9 355 aa9□□□□□ -0.97
SIX4-202ENST00000554079 REEP4Q9H6H4 257 aa9□□□□□ -0.97
SIX4-202ENST00000554079 MVB12BQ9H7P6 319 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ATP13A1Q9HD20 1204 aa9□□□□□ -0.97
SIX4-202ENST00000554079 CRTAC1Q9NQ79 661 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NRBP2Q9NSY0 501 aa9□□□□□ -0.97
SIX4-202ENST00000554079 COX16Q9P0S2 106 aa9□□□□□ -0.97
SIX4-202ENST00000554079 CLEC4AQ9UMR7 237 aa9□□□□□ -0.97
SIX4-202ENST00000554079 FLVCR2Q9UPI3 526 aa9□□□□□ -0.97
SIX4-202ENST00000554079 TP53TG5Q9Y2B4 290 aa9□□□□□ -0.97
SIX4-202ENST00000554079 SCN8AQ9UQD0 1980 aa9□□□□□ -0.97
SIX4-202ENST00000554079 CKAP5Q14008 2032 aa9□□□□□ -0.97
SIX4-202ENST00000554079 HEPACAM2A8MVW5 462 aa9□□□□□ -0.97
SIX4-202ENST00000554079 CACNB4O00305 520 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 OR7A17O14581 309 aa9□□□□□ -0.97
SIX4-202ENST00000554079 GABRDO14764 452 aa9□□□□□ -0.97
SIX4-202ENST00000554079 FPGTO14772 594 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NFATC1O95644 943 aa9□□□□□ -0.97
SIX4-202ENST00000554079 CD3GP09693 182 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ATXN1LP0C7T5 689 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 SAGP10523 405 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 ACPPP15309 386 aa9□□□□□ -0.97
SIX4-202ENST00000554079 GPX2P18283 190 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NFYBP25208 207 aa9□□□□□ -0.97
SIX4-202ENST00000554079 SDHAP31040 664 aa9□□□□□ -0.97
SIX4-202ENST00000554079 THBS2P35442 1172 aa9□□□□□ -0.97
SIX4-202ENST00000554079 GAS1P54826 345 aa9□□□□□ -0.97
SIX4-202ENST00000554079 PSMA6P60900 246 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 RAB2AP61019 212 aa9□□□□□ -0.97
SIX4-202ENST00000554079 RAC1P63000 192 aa9□□□□□ -0.97
SIX4-202ENST00000554079 FAM189BP81408 668 aa9□□□□□ -0.97
SIX4-202ENST00000554079 TAP2Q03519 686 aa9□□□□□ -0.97
SIX4-202ENST00000554079 MAD2L1Q13257 205 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 VEZF1Q14119 521 aa9□□□□□ -0.97
SIX4-202ENST00000554079 XKR3Q5GH77 459 aa9□□□□□ -0.97
SIX4-202ENST00000554079 OR2G6Q5TZ20 316 aa9□□□□□ -0.97
SIX4-202ENST00000554079 H3F3CQ6NXT2 135 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ANGPTL8Q6UXH0 198 aa9□□□□□ -0.97
SIX4-202ENST00000554079 IL20RBQ6UXL0 311 aa9□□□□□ -0.97
SIX4-202ENST00000554079 SMIM5Q71RC9 77 aa9□□□□□ -0.97
SIX4-202ENST00000554079 BCDIN3DQ7Z5W3 292 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 MILR1Q7Z6M3 343 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ACOT1Q86TX2 421 aa9□□□□□ -0.97
SIX4-202ENST00000554079 AMIGO3Q86WK7 504 aa9□□□□□ -0.97
SIX4-202ENST00000554079 TGIF2LXQ8IUE1 241 aa9□□□□□ -0.97
SIX4-202ENST00000554079 MEIOBQ8N635 442 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ZNF383Q8NA42 475 aa9□□□□□ -0.97
SIX4-202ENST00000554079 C11orf65Q8NCR3 313 aa9□□□□□ -0.97
SIX4-202ENST00000554079 OR51Q1Q8NH59 317 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NEIL3Q8TAT5 605 aa9□□□□□ -0.97
SIX4-202ENST00000554079 SLAMF9Q96A28 289 aa9□□□□□ -0.97
SIX4-202ENST00000554079 PNPLA2Q96AD5 504 aa9□□□□□ -0.97
SIX4-202ENST00000554079 HPDLQ96IR7 371 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ZDHHC15Q96MV8 337 aa9□□□□□ -0.97
SIX4-202ENST00000554079 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
SIX4-202ENST00000554079 DUSP16Q9BY84 665 aa9□□□□□ -0.97
SIX4-202ENST00000554079 CHRDQ9H2X0 955 aa9□□□□□ -0.97
SIX4-202ENST00000554079 WDR26Q9H7D7 661 aa9□□□□□ -0.97
SIX4-202ENST00000554079 KCNK12Q9HB15 430 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NANSQ9NR45 359 aa9□□□□□ -0.97
SIX4-202ENST00000554079 PIGVQ9NUD9 493 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NFKBIL1Q9UBC1 381 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 ZNF629Q9UEG4 869 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 TESQ9UGI8 421 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 FBXL3Q9UKT7 428 aa9□□□□□ -0.97
SIX4-202ENST00000554079 PCDHB10Q9UN67 800 aa9□□□□□ -0.97
SIX4-202ENST00000554079 PCDHB9Q9Y5E1 797 aa9□□□□□ -0.97
SIX4-202ENST00000554079 A0A1B0GVC2 190 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 CXorf65A6NEN9 183 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 PRAMEF25A6NGN4 478 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 A6NIN4 97 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 MARCH11A6NNE9 402 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 OIP5O43482 229 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 IFNA10P01566 189 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 ZNF35P13682 527 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 TNFRSF1BP20333 461 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 S100A3P33764 101 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 CHI3L1P36222 383 aaPredicted RBP8.99□□□□□ -0.97
SIX4-202ENST00000554079 DGCR2P98153 550 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 OCLNQ16625 522 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 ATP13A5Q4VNC0 1218 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 PYY3Q5JQD4 70 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 ZCCHC12Q6PEW1 402 aa8.99□□□□□ -0.97
SIX4-202ENST00000554079 FAM111BQ6SJ93 734 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms