RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GAB1Q13480 694 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 VASNQ6EMK4 673 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 WDR93Q6P2C0 686 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 POMZP3Q6PJE2 187 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 ZAR1Q86SH2 424 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 EID3Q8N140 333 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 ASB5Q8WWX0 329 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 ELP4Q96EB1 424 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 PPP1R36Q96LQ0 422 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 TRIB1Q96RU8 372 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 TREX2Q9BQ50 279 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-206ENST00000553529 G6PC3Q9BUM1 346 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 IQCGQ9H095 443 aaKnown RBP16.58■□□□□ 0.24
SHMT2-206ENST00000553529 QPCTLQ9NXS2 382 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 C19orf53Q9UNZ5 99 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-206ENST00000553529 TRAF6Q9Y4K3 522 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 PCNX3Q9H6A9 2034 aa16.58■□□□□ 0.24
SHMT2-206ENST00000553529 ABCA12Q86UK0 2595 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 OR6C70A6NIJ9 312 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 SLC28A1O00337 649 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 NAGAP17050 411 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 IL12BP29460 328 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 MPIP34949 423 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 ETV4P43268 484 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 ZFP36L2P47974 494 aaKnown RBP16.57■□□□□ 0.24
SHMT2-206ENST00000553529 DCAF7P61962 342 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 TLE4Q04727 773 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 MPP2Q14168 576 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 SLC30A6Q6NXT4 461 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 OR2L13Q8N349 312 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 RNF138Q8WVD3 245 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHMT2-206ENST00000553529 C16orf58Q96GQ5 468 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 YIPF4Q9BSR8 244 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 C20orf27Q9GZN8 174 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 KCNJ16Q9NPI9 418 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 DDX18Q9NVP1 670 aaKnown RBP16.57■□□□□ 0.24
SHMT2-206ENST00000553529 FBXO34Q9NWN3 711 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 OR10H1Q9Y4A9 318 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 WIF1Q9Y5W5 379 aa16.57■□□□□ 0.24
SHMT2-206ENST00000553529 SHISA8B8ZZ34 492 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 H0YC42 278 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 PDPK1O15530 556 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 RGS14O43566 566 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 ZNF500O60304 480 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-206ENST00000553529 NPHS1O60500 1241 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 PEX11AO75192 247 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 BPGMP07738 259 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 BCKDHAP12694 445 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 GRK2P25098 689 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 NTSP30990 170 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 ZNF136P52737 540 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 PRKAG1P54619 331 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 TPD52P55327 224 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-206ENST00000553529 KRT71Q3SY84 523 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 EMBQ6PCB8 327 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 APOOLQ6UXV4 268 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 RIBC1Q8N443 379 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-206ENST00000553529 KRTCAP2Q8N6L1 136 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 C9orf106Q8NAJ2 232 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 OR7A2PQ8NGA2 310 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 OR6Y1Q8NGX8 325 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 OR14L1PQ8NHC6 308 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 ABTB1Q969K4 478 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-206ENST00000553529 NPAS1Q99742 590 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 SPOCK3Q9BQ16 436 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 TUBA1CQ9BQE3 449 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 PRDM14Q9GZV8 571 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 TAS2R7Q9NYW3 318 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 MED11Q9P086 117 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 SH3BP4Q9P0V3 963 aa16.56■□□□□ 0.24
SHMT2-206ENST00000553529 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 PLOD2O00469 737 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 ACP2P11117 423 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 BMP5P22003 454 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 FOXF2Q12947 444 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 PDE7AQ13946 482 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 PTGR1Q14914 329 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 XKR7Q5GH72 579 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 TMEM81Q6P7N7 255 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 SZRD1Q7Z422 152 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 MARCH3Q86UD3 253 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 PLCZ1Q86YW0 608 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 TRIM42Q8IWZ5 723 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 FAM76AQ8TAV0 307 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 PPCDCQ96CD2 204 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 GIMAP5Q96F15 307 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 CCT7Q99832 543 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 OR2B2Q9GZK3 357 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 REEP4Q9H6H4 257 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 SIRT3Q9NTG7 399 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-206ENST00000553529 TAS2R9Q9NYW1 312 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 MID2Q9UJV3 735 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 ITGB1BP2Q9UKP3 347 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 CBLCQ9ULV8 474 aa16.55■□□□□ 0.24
SHMT2-206ENST00000553529 INTS1Q8N201 2190 aaKnown RBP16.54■□□□□ 0.24
SHMT2-206ENST00000553529 A0A087WV62 115 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 ZIC3O60481 467 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 BCAS2O75934 225 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms