RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 DIO3P55073 304 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CLDN18P56856 261 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CORO7P57737 925 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 DMTNQ08495 405 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 FUT7Q11130 342 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CHIT1Q13231 466 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 SLAMF1Q13291 335 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 TNK1Q13470 666 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 GAB1Q13480 694 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 FRG1Q14331 258 aaKnown RBP6.57□□□□□ -1.36
ATXN3-219ENST00000553488 OR4D1Q15615 310 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 AP5B1Q2VPB7 878 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 PAGE2BQ5JRK9 111 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CDKL4Q5MAI5 379 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 DEPDC1Q5TB30 811 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 OR4C11Q6IEV9 310 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF474Q6S9Z5 364 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ANGPTL8Q6UXH0 198 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 LCNL1Q6ZST4 164 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF550Q7Z398 422 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 GPR180Q86V85 440 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 PRR22Q8IZ63 422 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 TCAIMQ8N3R3 496 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 RNF175Q8N4F7 328 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF615Q8N8J6 731 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 SNX31Q8N9S9 440 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 WDSUB1Q8N9V3 476 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 C17orf47Q8NEP4 570 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 RIT1Q92963 219 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ANAPC16Q96DE5 110 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 STARD4Q96DR4 205 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 NODALQ96S42 347 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 MED18Q9BUE0 208 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 DERL2Q9GZP9 239 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 OR51B5Q9H339 312 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CXorf21Q9HAI6 301 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 POPDC3Q9HBV1 291 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 GALNT9Q9HCQ5 603 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 SERHLQ9NQF3 203 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 MS4A12Q9NXJ0 267 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF226Q9NYT6 803 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 HEY2Q9UBP5 337 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 PHF11Q9UIL8 331 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 CHMP2BQ9UQN3 213 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 EMC9Q9Y3B6 208 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 ASB4Q9Y574 426 aa6.57□□□□□ -1.36
ATXN3-219ENST00000553488 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 A0A0A6YYD5 115 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 A0A1W2PR48 441 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 LRRC14BA6NHZ5 514 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CAPN14A8MX76 684 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 OR10H2O60403 315 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CDH16O75309 829 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 EEDO75530 441 aaKnown RBP6.56□□□□□ -1.36
ATXN3-219ENST00000553488 STK16O75716 305 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 AIFM1O95831 613 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CGAP01215 116 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CRHP06850 196 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 THBDP07204 575 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 SLC35E2BP0CK96 405 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 SLC35E2P0CK97 266 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 NR2F6P10588 404 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CD1DP15813 335 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 SERPINB1P30740 379 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 ELK3P41970 407 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 FNTAP49354 379 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 STARP49675 285 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 NR1H2P55055 460 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 LINC00310P59036 64 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 EEF1A1P68104 462 aaKnown RBP6.56□□□□□ -1.36
ATXN3-219ENST00000553488 IRF8Q02556 426 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 SRYQ05066 204 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 TOMM20Q15388 145 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 GUSBP1Q15486 140 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 EEF1A1P5Q5VTE0 462 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 SULT1C3Q6IMI6 304 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 HMBOX1Q6NT76 420 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 ENPP6Q6UWR7 440 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 LRRC70Q7Z2Q7 622 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 GRAMD2AQ8IUY3 354 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 SPATA6LQ8N4H0 392 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 MAPK1IP1LQ8NDC0 245 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 NUP43Q8NFH3 380 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 OR7G3Q8NG95 312 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 OR1J4Q8NGS1 313 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 UCN3Q969E3 161 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CAVIN3Q969G5 261 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CMTM7Q96FZ5 175 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CFAP36Q96G28 342 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 MS4A14Q96JA4 679 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 KRT12Q99456 494 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 OSBPL11Q9BXB4 747 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 NXF5Q9H1B4 397 aaKnown RBP6.56□□□□□ -1.36
ATXN3-219ENST00000553488 OPN3Q9H1Y3 402 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-219ENST00000553488 OR10A5Q9H207 317 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CNTD2Q9H8S5 307 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 CNOT10Q9H9A5 744 aaKnown RBP6.56□□□□□ -1.36
ATXN3-219ENST00000553488 PPANQ9NQ55 473 aaKnown RBP6.56□□□□□ -1.36
ATXN3-219ENST00000553488 PTBP2Q9UKA9 531 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms